Paraburkholderia atlantica CCGE1002: BC1002_4407
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Entry
BC1002_4407 CDS
T01217
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18903
outer membrane protein, multidrug efflux system
Organism
bge
Paraburkholderia atlantica CCGE1002
Module
bge_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_4407
01504 Antimicrobial resistance genes [BR:
bge01504
]
BC1002_4407
Transporters [BR:
bge02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1002_4407
Antimicrobial resistance genes [BR:
bge01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
BC1002_4407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADG18390
UniProt:
D5WIU5
LinkDB
All DBs
Position
2:complement(1319246..1320874)
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AA seq
542 aa
AA seq
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MKRFESRFVSLRGWGRAAASGLLIALLAACSLEPTYKRPDVDTPAAFKEAPAVKTSAAAA
SGAGAGSAGAAQSNGTWKPAEPADSALRGEWWKVFGDPQLDALEEQAAAANQDLKAAAAR
VQQARAVTQAAKSDWFPKLDAGFGPTRERASAASQFQPDSAGGTTGTIWRAQVGASYEAD
LFGRVSSNVNAARSDEQQSEALFRSVQLSLQADVAQNYFQLRELDTDQDLYRRTVALRED
TLKLVQRRFKEGDISELDLSRARNELASARADAVGVARQRAASEHSLAILLGKPPADFTF
AEAPLALVTVRVPAGLPSALLERRPDIAAAERAMQAANARVGLAKSAFFPKLDITGAFGF
ESATLGDLFMWSSRAFILGPAVGTALTMPIFDGGRRKANLAQARSKYDEDVAQYRQQVLV
AFREVEDNLADLRLLDDQMREQNDAVDASQRAAHLSRTQYTEGAVSYLDVIDGERQVLQS
QLQASHLAGTQAVATVNLIRALGGGWGDVTAGGTAVGAVPVGASGSAAEAAAISAQQQVA
KR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctttgaatctcgctttgtatccttgcgcggatggggccgcgcggccgcgagc
ggtttgttgatcgcgctgctggctgcttgctcgctcgagccgacatacaagcgccccgac
gtcgatacgccggcggcgttcaaggaagcgcccgcggtgaagacgtcggctgctgcggcg
tcgggcgcgggggctggttcggccggggcggcacaaagcaacggcacgtggaaaccggcc
gagcccgccgacagcgcgctgcgcggcgaatggtggaaggtattcggcgatccgcagctc
gacgcgctcgaagagcaggccgccgccgcgaaccaggacctgaaggccgcggccgcgcgc
gtgcagcaggcacgggcggtcacgcaggcggcgaagtccgactggttcccgaagctcgac
gcgggcttcggcccgacgcgcgaacgcgcgtcggcggcttcgcaattccagccggacagc
gcgggcggcacgaccggcacgatctggcgcgcgcaggtcggcgcatcgtatgaagcggat
ctgttcgggcgcgtcagctcgaacgtgaacgcggcgcgctcggacgagcagcagagcgaa
gcgctgttccgttcagtgcagctgtcgttgcaggccgacgtcgcgcagaactacttccag
ttgcgcgagctcgacacggaccaggatctgtaccgccgcacggtcgcgttgcgcgaagac
acgctgaagctcgtccagcggcgcttcaaggaaggcgatatcagcgagctggatctgtcg
cgtgcgcgtaacgagctcgccagcgcgcgtgccgatgcggtcggcgtcgcgcggcagcgg
gcggcctctgagcacagcctcgcgattctgctcggcaagccgcccgcggatttcacgttc
gcggaagcgccgctcgcgctggtgacggtgcgcgtgccggccggtttgccgtcggcgctg
ctcgaacgcaggcctgacatcgcggcagccgagcgcgcgatgcaggcagcgaatgcgcgc
gtcgggctcgcgaagtcggcgttcttcccgaagctcgacatcaccggcgcgttcggcttt
gaatcggcgacgctcggcgatctgttcatgtggtcgagccgcgcgttcatcctcggtccg
gccgtgggtaccgcgctgacgatgccgatcttcgacggcggtcgtcgcaaggccaatctc
gcgcaggcgcgttcgaagtacgacgaggacgtcgcgcaatatcgccagcaggtgctcgtg
gcgttccgtgaagtcgaagacaatctcgccgatctgcgcttgctcgacgatcagatgcgc
gagcagaacgacgcggtcgatgcgtcgcagcgcgccgcacatctgtcgcgcacgcagtac
acggagggtgcggtcagctatctcgacgtgatcgacggcgagcggcaggtgctgcagtca
caattgcaggcgagccatctggcgggcacgcaggctgtcgcgaccgtgaatctgattcgc
gcgctcggtggtggttggggcgatgtgacggcgggggggacggcggtgggcgcggtgccg
gttggtgcttctggctccgcggctgaagctgcagccatttcggcacaacagcaagtggcg
aagcgctga
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