Paraburkholderia atlantica CCGE1002: BC1002_5413
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Entry
BC1002_5413 CDS
T01217
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge01501
beta-Lactam resistance
bge01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BC1002_5413
01503 Cationic antimicrobial peptide (CAMP) resistance
BC1002_5413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bge03036
]
BC1002_5413
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_5413
01504 Antimicrobial resistance genes [BR:
bge01504
]
BC1002_5413
Chromosome and associated proteins [BR:
bge03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BC1002_5413
Transporters [BR:
bge02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BC1002_5413
Antimicrobial resistance genes [BR:
bge01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BC1002_5413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
DUF402
Motif
Other DBs
NCBI-ProteinID:
ADG19343
UniProt:
D5WFI9
LinkDB
All DBs
Position
2:complement(2419332..2420552)
Genome browser
AA seq
406 aa
AA seq
DB search
MNPHLPPEPSDAEAQHPARAGFAARGTTIAIGLACVAGVLLTAGIAPRLEARTAQKHQVA
AQRELVVSTVTATRAPSTQDLLLPGSVSSWADASVYARTSGYVQHWYTDIGAHVKAGQTL
AQIDTPELDAQLQQARADEATAEANYRFASTTAQRWQTMLQTQSVSQQDAQAKSSDAAAK
LATLQAAQANVARLQELVSYQKVTAPFDGVITARNVQVGALVTAGGTPGLATMPGELFHI
AQTDRLRIYVDVPQDDASLVGAGTAVSVTTQQYPGRRFEASVARSSNVIDPVSRTLRVEV
DMDNRDGALMPGAYAQVHLSLTTATPALELPVSALLFRPDGVTIAVVDAHDKVQLRKVTI
GRDFGTYVEVATGLSPTDRVIDNPGDAIADGQSVRVAATAAPGSKA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcaccttccgcccgagcctagcgacgccgaagcacagcaccccgcccgcgcc
ggtttcgccgcacggggaaccacgatcgccatcggcctcgcctgtgttgccggggtgtta
ctcaccgccggcatcgcgccgcgcctcgaagcccgcacggcgcagaagcatcaggtcgca
gcgcaacgtgagctggtggtgtcgaccgtcaccgcgacgcgcgcgccgtcgacgcaagac
ctgttgctgcccggctcggtctcttcctgggccgacgcatcggtctacgcgcgcacgagt
ggttacgtccagcactggtacacggacatcggcgcgcacgtcaaggccggccagacgctc
gcccagatcgacacgccggaactcgacgcgcaactccagcaggcgcgtgccgacgaagcg
accgccgaggcgaactatcgctttgcgagcaccaccgcacagcgctggcaaacgatgctg
cagacgcaatcggtttcgcagcaggacgcgcaggcaaaatccagcgacgcggcggccaag
ctcgccacgctgcaggcggcgcaggccaacgtcgcgcggctgcaggagctcgtttcatac
cagaaggtgacggcacccttcgatggcgtgatcactgcgcgcaacgtgcaggtgggtgcg
ctcgtcacggcgggtggcacgcccggcctcgccacgatgccgggcgagctgttccacatc
gcccagaccgaccggcttcgcatctacgtcgacgttccccaggacgacgctagcctggtc
ggcgccggaacagcggtgtcggtgacgacgcagcagtatccgggccgccgcttcgaggcg
agcgtcgcgcgcagctcgaacgtgatcgacccggtgagccgcacgttgcgcgtggaagtc
gatatggataaccgcgacggcgcgttgatgcccggcgcctatgcgcaggtgcatctgtcg
ctcaccacggcgacgcccgcgctcgaactgcccgtgagcgcgctgctgtttcgcccggac
ggtgtcacgatcgcggtggtggacgcccacgacaaggtgcagcttcgcaaggtcacgatc
ggccgcgacttcggcacctacgtcgaggtcgcaaccggactctcgccgacggatcgcgtg
atcgacaatcccggcgacgcgatcgccgacggccaaagcgtgcgcgtggcggcaacggcc
gctccgggcagcaaagcttag
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