Paraburkholderia atlantica CCGE1002: BC1002_5535
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Entry
BC1002_5535 CDS
T01217
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge01501
beta-Lactam resistance
bge01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BC1002_5535
01503 Cationic antimicrobial peptide (CAMP) resistance
BC1002_5535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bge03036
]
BC1002_5535
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_5535
01504 Antimicrobial resistance genes [BR:
bge01504
]
BC1002_5535
Chromosome and associated proteins [BR:
bge03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BC1002_5535
Transporters [BR:
bge02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BC1002_5535
Antimicrobial resistance genes [BR:
bge01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BC1002_5535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_RND
YknX_C
Beta-barrel_RND_2
HH_EMRA
CzcB_C
BSH_CusB
HH_YBHG
HH_AAEA_pHBA
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
ADG19460
UniProt:
D5WG84
LinkDB
All DBs
Position
2:2561086..2562336
Genome browser
AA seq
416 aa
AA seq
DB search
MKTVPVCLASPRPDSRGALRLLAVVAALTLLTPLASCKKEVPPQVAAVPEVTVMTVAQQD
TPVDFEFTAQTQSSREVEIRSRVDGFLDKRMYTEGVLVKTGQTLFQMDPKPFEAALHTAK
GQLAQQQARLEVAKANLARVEPLAAQNALSKKDLDDAIGNEKQSAAAVFAAQGEVDTAML
NLGYTTIKSPLNGLSSFARQQDGSYVTATGNSSLLTYVYQLDPMWVNFSISENEMLKYRD
EIAAGRLRFPPNNDFSVHLILADGTPYAQQGQIDFANPAFNTETGTFLVRATFANPKNTL
RPGQFVKARVGGAIRPNATLVPQRAVLQGAKSHFVWVVGNDGKAHQRVVEVGEWQGDNWF
VSDGLKAGERIVVDGALRVTADSQLKIVKELPAVKDSAAVATAASQSGAAAAPAAE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtacccgtgtgtttggcctcgccgcggccggattctcgcggcgctctccgg
ttgctcgccgtcgtcgcggcgctgacgctgctcacaccgctcgcgtcgtgcaagaaggag
gtcccgccgcaggtcgccgccgtgcctgaagtgaccgtgatgacggtcgctcagcaggac
acgccggtcgatttcgaattcaccgcgcaaacccagagttcgcgcgaagtcgagatccgc
tcacgggtggacggcttcctcgataagcgcatgtataccgaaggcgtgctggtcaagacc
ggacaaacgctgttccagatggacccgaagccgttcgaggccgcgctgcataccgcgaaa
gggcaactggcccagcagcaggcgcgtctcgaagtcgccaaggccaatctcgcgcgcgtg
gagcctttggcggcgcagaacgcattgagcaagaaggatctcgacgacgcgatcggcaac
gagaagcaaagcgccgccgcggtgttcgccgcgcagggcgaagtcgataccgcgatgctg
aacctcggctacacgacgatcaagtcgccgctgaacgggctgtcgagctttgcgcgtcag
caggatggcagctacgtgacggcaaccggcaacagcagcttgctgacctacgtgtaccag
ctcgacccgatgtgggtgaacttcagcatctccgagaacgaaatgctgaagtaccgcgac
gaaatcgcggccggacgactgcgctttcccccgaacaacgatttctccgtgcatctgatt
ctcgccgacggcacaccctatgcccagcagggccagatcgacttcgcgaacccggcgttc
aacacggaaacgggaaccttcctcgtgcgcgcgaccttcgccaacccgaaaaacacgctg
cgtccggggcagttcgtgaaggcccgcgtcggcggtgcgatccggcccaacgcgacgctg
gtgccgcagcgcgcggtgctgcagggcgcgaagagtcacttcgtatgggtcgtgggtaac
gatggcaaggcgcatcaacgagtcgtcgaagtcggcgagtggcagggcgacaactggttc
gtgtccgatggactgaaggcgggcgagcgcatcgtcgtggatggcgcgctgcgcgtcacc
gcggattcgcagctgaagatcgtcaaggagctgccagcggtcaaggactcggcggccgtg
gcgacggctgcatcgcaaagcggcgcggcagcggcgcccgctgccgagtga
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