Bradyrhizobium genosp. P: ACP2YO_38115
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Entry
ACP2YO_38115 CDS
T11254
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bgep Bradyrhizobium genosp. P
Pathway
bgep00300
Lysine biosynthesis
bgep00550
Peptidoglycan biosynthesis
bgep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bgep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACP2YO_38115
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACP2YO_38115
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bgep01011
]
ACP2YO_38115
Enzymes [BR:
bgep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ACP2YO_38115
Peptidoglycan biosynthesis and degradation proteins [BR:
bgep01011
]
Precursor biosynthesis
Amino acid ligase
ACP2YO_38115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
XRZ25840
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All DBs
Position
complement(7934571..7936046)
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AA seq
491 aa
AA seq
DB search
MRLRDLFSDDAAIDPRADTVAVGGLVVRGLAVDSRAVKPGDLFFALAGSRTDGVRFIDAA
IKAGAVAVAGDHLPQGEARVPFVITTNARRALALAAARFYPRQPQTIAAVTGTSGKTSVA
AFTRQIWQRLGQVSASIGTIGLVSDKRTVYGSLTTPDPIALHRQLDEITADGVTHLAFEA
SSHGLDQYRLDGVRIAAGGFTNLSRDHMDYHPDVAHYLNAKLRLFRDLVVDGGTAVISAD
HDCSQTVTDAATARKLRVIAVGRNADGAGDGIRLVGATIDGFAQTLVIEHRRRTHTIRLP
LVGEFQIENALVAAGLAIGTGSVADDVIGNLEHLEGAKGRLERVGEHNGAPIFVDYAHKP
DALAKALQALRPYAKRKLVVIFGAGGDRDAGKRPIMGAIAAENADRVIVTDDNPRSEKPD
AIRAAIMAAAKGAREIGDRAEAIRAGIADLEPGDALLVAGKGHEVGQIIGDTTLPFSDHD
AVAAALAARGA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagacttcgcgacctcttcagcgatgacgccgcgatcgacccgcgtgccgacacggtt
gcggtcggaggacttgtggttagaggacttgcggtcgacagccgcgcggtgaagccgggc
gatctgttctttgcgctggccggcagccgaaccgatggtgtgcgcttcatcgacgcggcg
atcaaggccggcgcggtggccgtcgccggcgatcatctgccgcaaggcgaggcccgtgtg
ccgttcgtcatcacgacgaatgcgcgccgcgcgctggcgctggccgcggcaagattttat
ccgcggcagccgcaaacgatcgcggccgtgaccggcaccagcggcaagacctcggttgcg
gccttcacgcgccagatctggcagcggctcggccaggtgtccgcgagcatcggcaccatc
ggcctggtgtcggacaagcgcaccgtctacggctcgctgaccacgcccgatccgatcgcg
ctgcatcggcagctcgacgagatcacggccgacggcgtcacccatctggcgttcgaggcc
tcgtcacacggcctcgaccaatatcgcctcgacggcgtgcgcattgccgccggcggcttc
accaacctgtcgcgcgaccacatggattaccatcctgacgtcgcgcattacctcaatgca
aagctgcggctgttccgcgatctcgtcgtcgacggcggcaccgccgtgatctcggccgat
catgattgctcgcagaccgtgaccgatgcggcgaccgcacgcaagcttcgcgtcatcgcg
gtcgggcgcaatgccgatggtgcaggcgacggcattcggctggtcggcgccacgatcgac
ggctttgcgcagacgcttgtcatcgagcatcgccgccgaacgcacacgatccggctgccg
ctggtcggcgaattccagatcgagaatgcgctggtcgcggccggccttgcgatcggcacc
ggcagcgtcgcggacgacgtcatcggcaacctcgaacatctcgaaggcgccaagggccgg
ctggagcgcgtcggcgagcacaatggcgcgccgattttcgtcgactacgcgcacaagccg
gatgcgctcgccaaggcgttgcaggcgctgcggccctacgcaaagcgcaagctcgtcgtg
atctttggcgccggcggcgatcgcgacgcaggcaagcgcccgatcatgggcgcgatcgca
gccgagaatgccgatcgtgtcatcgtcaccgacgacaatccgcgcagcgagaagccggac
gcgatccgcgccgcgatcatggccgctgcaaagggtgcgcgcgagatcggcgaccgcgcc
gaggcgatccgcgccggcatcgcggaccttgagccaggcgacgcattgctggtggcaggt
aaggggcacgaggtcgggcagatcatcggcgacacgacgctgcccttcagcgatcacgat
gcggtggcggcggcattggcggcgaggggggcatga
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