Blastomyces gilchristii: BDBG_01513
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Entry
BDBG_01513 CDS
T06540
Name
(RefSeq) DNA ligase (ATP)
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BDBG_01513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_01513
Enzymes [BR:
bgh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BDBG_01513
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
BDBG_01513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
YbgU
Motif
Other DBs
NCBI-GeneID:
8507024
NCBI-ProteinID:
XP_002628605
UniProt:
A0A179UAU4
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MGFKFSYVCDLFTSLETNLTLKASTGSRVRNPDVSTIINWFNQHGKQIHGGETDRLALLS
CLLPERRPERVFGLKEPSLVKVIGRCLLLGTSRRLALDSYKICGNGDLGQCVENVMTQAE
NNNPEESGVTVEEVDAVLSDIASRCRFSSPDVRRQRSATSVDEALGPILRRLTSRDAKWF
TRIILKDLSPLTLPARLVLRSFHFLLPDLLLLQDSLRAAVDLLSRDPIKRFPWRPDPTYA
KLLASFASSHISLTIGVKVGRAMFYKARSIKHCCKMVGKRTMSVERKYDGEYCQIHIDLS
KDSGCIRIFSKSGKDSTADRSGIHSTVNECLRIGKSGCKISKNCILEGELLVWSDRESKL
LPFHKLRKHVKRSGSFIGTENDSPVHFYEHLYIMLFDVLLMDDQVCLLKSYKERRELLRK
ISHPIDGRAGIAEQEYINFSLSNSQEILRNSFATAISQRWEGLVLKSSEEPYFNIGQQED
SSLGHWIKMKKDYIPGIGDTADFALIGARYDAREAAHLRAIKGVKWTSFFVGCRDGSSKN
PYDARPIFRVVDLLNRHNVNTEFIRTLNQSGQFCSCDVDDDDAPFTIKTDQVQLPKVQVL
FKNPFVVEMVGSGFEKPAGVNYFTLRFPRVLKIHMDRDVEDATTLKELQELAEAANSVPT
DELSQEVAWLADRLGEVDGKSGYIIDSSDHSSLSPASIIPPNDMDNEQSDTSLGPLAMNE
LDASQKGSRAVSKKRPKITKSRSPCIAIHLDNTQTSADTPMSHSQDNSANRHLADLTNLS
QPTPMPTYINTDDREDVNDTSIPENEVECSTTFGERDEDKLNHFSQLRQRNGSRPNPSHE
QQSSPEPTVSLEVSNLAVGRSDIFDSKPIPSVPECPLFLSETPILLGTGVSHDQVDSIPL
DTKQLLTPSTADFLERVLNAKFPDTPMLHSSSLGRTQAFPKCSGIVLVESNTANTPQAAS
DIARIGNALATTQRASGMPSQKGKIIFLRCEAILQHGFFENNQTGHLENIQERWERLGKR
LFAGCLKWGYGITACPRKGKRKRRKFRSTDADFGEKDGAGRAMANGSPSLLTMDVDVQLS
WDWREILSLV
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggggtttaaattttcctacgtgtgcgacctctttacgagcctcgaaacgaacctcact
ttaaaggcatcaacggggtcgagggttagaaatcccgacgtttcaaccattatcaactgg
tttaaccagcacgggaaacaaatccatggaggagagactgaccgccttgctcttctgtca
tgtttgttaccagaaaggcggccggagagagtatttggattaaaggagccatccctcgtt
aaggtcattggcaggtgtcttctccttgggacttcgcgaaggctagcactggattcatac
aaaatatgcgggaacggtgacctaggccagtgtgtcgaaaatgtgatgacgcaagcggag
aacaacaaccccgaggaatctggagtaactgttgaagaagtcgatgctgtcttgagtgat
attgcgtcgagatgtcggttctctagcccagacgtgaggagacagcgaagtgctaccagc
gtggatgaggcacttggaccaattttacgacgcctaacaagccgcgatgcgaagtggttt
actaggatcattttgaaagatctcagccctttaaccctgccggctcgtttggtccttcgg
agttttcatttcctccttcccgatctacttctattacaggattcattgagagcagccgtg
gacttgctgagccgtgatccgatcaaaagatttccttggcgtccagatcctacctatgct
aaacttctggcttctttcgcgtcttctcatatatctcttaccattggagtgaaagttgga
agggcaatgttttataaagccaggagcattaaacattgctgcaagatggtagggaaacgc
acaatgagcgtcgaacggaaatatgatggagagtactgtcagatacatattgacctttcc
aaagactcgggctgtatacggatcttttcgaaaagtgggaaagactcaactgcagacaga
agcggtattcattctactgtgaatgagtgcttaagaattggaaagtccggctgcaaaata
tctaagaactgcattttagaaggagaacttcttgtctggagtgacagggaatcaaaactg
ttgccctttcataagcttcggaagcatgtcaagagatctggttcattcattggtactgaa
aatgactcgccggtacatttctatgagcatctatatatcatgctttttgatgtattattg
atggacgatcaagtttgtttactaaagtcatataaggaacgcagggaattactgaggaaa
atttctcaccctattgatgggcgtgctgggattgcggaacaggagtatatcaacttctcg
ttgtcaaacagtcaggagatcttgagaaactctttcgccacagccatatcgcaacgttgg
gaaggactcgttctaaaatcaagcgaagaaccatacttcaatattgggcagcaagaggac
tctagcttaggacattggattaaaatgaaaaaggactatattccagggataggggatacc
gcagatttcgccctgataggagcaagatatgacgctcgtgaagctgctcatctccgggct
attaaaggtgttaaatggacatcattcttcgtgggatgccgcgatggcagttcaaaaaat
ccctacgatgcgcggccgatatttcgcgtcgtggacctcctcaatcgacacaatgtgaac
actgaatttatacgaacgcttaatcaatccggccagttttgcagctgtgatgtagatgat
gacgatgctccatttaccataaaaacagatcaggtgcaacttcccaaagtacaagtgctt
ttcaagaacccctttgtggttgagatggtcggtagtggttttgagaagcctgcaggagtg
aactatttcacactacgctttccgcgtgtccttaaaatccatatggatcgggatgtggag
gatgctacaacactaaaagagctgcaagagttggctgaagcagcaaactcagtcccgaca
gatgagttgtctcaggaggtcgcctggttggcggaccgacttggtgaggtagatggaaag
tcaggctatattattgattcatcggaccattcgtctctgtccccggcttcgattatccct
cccaatgatatggacaatgagcagtctgatacatccttggggcctttggctatgaatgaa
cttgatgcttcccaaaagggttccagagcagtgagcaagaaaaggcccaaaatcacgaaa
tcgcgatcaccgtgtatcgcaatacacttagataatacccaaacctcagcagacactccc
atgtctcactcccaggataactcagcgaatcggcacctagcagaccttaccaacttatcc
caacccactccaatgccaacctatataaacaccgacgaccgtgaagacgtaaacgacacc
tccattcctgaaaatgaagtagaatgttcaacgacgtttggagagcgtgatgaagacaag
ttgaatcatttttctcaattgagacaacggaacgggtccaggccaaatccatctcatgaa
caacaaagttcccctgaaccgaccgttagtttggaagttagcaacctcgcagtcgggagg
tctgatatatttgacagcaaacctatcccctctgttcctgaatgtccattatttctctcc
gaaacaccaatcctgctaggaactggtgtatctcatgatcaagtcgactctattccgctt
gacaccaaacagctcttgacaccctccactgcagacttcctggaaagagtgcttaatgct
aaattcccagatacacccatgctccattccagtagcctgggaaggacacaagcatttccc
aaatgtagtggtattgtcctcgtcgaatccaatacagccaacacgccgcaagcagcatct
gacattgctcgaattggcaacgcacttgccaccactcagcgggctagcggcatgccatca
caaaaggggaaaataattttcctccgctgcgaagcaattttacagcacggcttctttgaa
aataaccaaacaggtcacctcgaaaacattcaagaaaggtgggagaggctgggcaagcgg
ttgtttgcgggatgtttgaagtgggggtatggtattaccgcttgcccacggaaggggaaa
cggaagcggaggaaattcagaagtactgatgcggacttcggggagaaggacggagctgga
agagccatggctaacggttctccgtcgctactaactatggacgttgatgttcagctcagt
tgggattggagagagatattatcgttggtatag
DBGET
integrated database retrieval system
