Bythopirellula goksoeyrii: Pr1d_19170
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Entry
Pr1d_19170 CDS
T09914
Symbol
pdg_1
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pr1d_19170 (pdg_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgok03400
]
Pr1d_19170 (pdg_1)
Enzymes [BR:
bgok01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pr1d_19170 (pdg_1)
DNA repair and recombination proteins [BR:
bgok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pr1d_19170 (pdg_1)
Prokaryotic type
Pr1d_19170 (pdg_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QEG34635
UniProt:
A0A5B9QAG3
LinkDB
All DBs
Position
complement(2336647..2337351)
Genome browser
AA seq
234 aa
AA seq
DB search
MPPKRVSKPTRPTSGSKKPAPSAELKSHAAKIIRQLKKDFPDADCALVHKTPFQLLVATI
LSAQCTDERVNLVCKDLFRKYKKPADFAAAPIGDLETAVKSTGFFRNKAKNIKACSTELV
GKYKGQVPQDLDSLVELAGVGRKTANVVLGTAYGIPTGVVVDTHVGRLSLRMGLTKQKDA
AKVEQDLMQLVPQDEWIGFSHRMILHGRQVCSARKPDCDNCSLQKSCPKVGVGK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaaacgtgtttccaagcctactcggccgaccagtggctcgaaaaagcctgcc
ccatctgccgagctgaaaagccacgcggcgaaaatcattcgacaattgaagaaagatttt
ccggatgccgattgtgccctggtccacaagacaccgtttcaactgctcgttgccacgatt
ctttccgcccagtgtacggacgaacgggtgaatctcgtctgcaaagacctgtttcgcaaa
tacaagaaacccgccgacttcgcggctgcccccattggagatcttgagacggccgtcaag
agcacaggtttcttccgcaataaggccaagaacatcaaagcgtgtagcacggaacttgta
ggtaaatacaaggggcaagtgccgcaagacttggattccttggttgaactagccggggtc
ggtcgtaagacagcgaatgtggtgctaggaaccgcctatggcatcccgacaggagtggtg
gtcgacacccatgtcggtcgtcttagcttgcgaatggggctcacgaaacaaaaagatgcc
gctaaagttgagcaggatctgatgcaactcgtcccacaagacgaatggattggattctcg
caccgtatgatcctccacggtcgacaagtttgctcggctcgcaagcccgattgtgataat
tgttcacttcagaagtcatgccccaaggttggggtaggcaagtag
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