Burkholderia plantarii PG1: BGL_1c28540
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Entry
BGL_1c28540 CDS
T03632
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bgp
Burkholderia plantarii PG1
Pathway
bgp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BGL_1c28540 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgp03400
]
BGL_1c28540 (nth)
Enzymes [BR:
bgp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BGL_1c28540 (nth)
DNA repair and recombination proteins [BR:
bgp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BGL_1c28540 (nth)
Prokaryotic type
BGL_1c28540 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
DUF4817
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AJK47332
UniProt:
A0A0B6RPV2
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All DBs
Position
1:3290247..3290891
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AA seq
214 aa
AA seq
DB search
MNPKKRHAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRRMFPVANT
PAQVLALGEEGVTDYIKTIGLYRTKAKNVVATCRILLDQYGGEVPADREALEGLPGVGRK
TANVVLNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPAEFHQDAHHWLI
LHGRYVCKARRPECWHCAIEPLCEFKPKTPPPLE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaagaaacgccacgcgatctacgaaacgctgcagagcctgaacccgcatccg
accacggaactcgagtactcgacgccgttcgagctgctgatcgcggtgatgctgtcggcg
caggccaccgacgtgtcggtcaacaaggcgatgcgccggatgttcccggtggcgaacacg
cccgcgcaggtactcgcgctcggcgaggagggcgtcaccgactacatcaagacgatcggc
ctgtatcgcaccaaggcgaagaacgtcgtcgcgacctgccggattctgctcgaccagtac
ggcggcgaggtgccggccgatcgcgaggcgctcgaaggcctgcccggggtggggcgcaag
accgccaacgtggtgttgaacacggcgttcggccacccgaccatcgccgtcgatacgcat
atcttccgcgtcgcgaaccgcaccgggctcgcgcccggcaaggacgtgcgcgccgtcgag
gcggcgctcgagaaattcacgccggccgagttccaccaggacgcgcaccactggctgatc
ctgcacggccgctacgtctgcaaggcgcgccgccccgagtgctggcactgcgcgatcgag
ccgctctgcgaattcaaaccgaagacgccgccgccgctcgaatag
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