Biomphalaria glabrata (bloodfluke planorb): 106050680
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Entry
106050680 CDS
T07368
Name
(RefSeq) ATP-dependent RNA helicase A-like isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106050680
03012 Translation factors [BR:
bgt03012
]
106050680
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106050680
5.6.2.6 RNA 3'-5' helicase
106050680
Spliceosome [BR:
bgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106050680
Translation factors [BR:
bgt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106050680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
DND1_DSRM
AAA_23
ATPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
106050680
NCBI-ProteinID:
XP_013061158
UniProt:
A0A9U8DUG4
A0A2C9KC51
LinkDB
All DBs
Position
Unknown
AA seq
1430 aa
AA seq
DB search
MDVKQVLYSWCGKNKVGTPNYEFSVGGPKHRQRFKCEVRLENFDYVGVGNSTNKKDSQAN
AAKDFIQYLVRIGKIKTDEVPPNLLGAAILEQTLEQDQIDGDSKDKCGSSGILPGGTLAP
HLRLQADGIGQEVGAPREFPPYQRGPPLAYMDRIAEKRKLEESEDCDFNAEIHGNWTMEN
AKSRLHQFLQMHKIKADYKYHVMGPDHNRSFAAEMSFFVKQIGLKLHARETGSNKQVASK
SCALSLVRQLYHMKVIEPNTGQKKKKGTEKLPPYEVNIGEELEMKIDQCLKQWGVEPVTY
FEPTEQNSSNEGEPEAPSPVTLINHPSLEEFDPAPAKNTPGVVSWSPPQPNWNPWSNCNI
DEGPLASASLDQISKDLKMALQIQYAEDENLKKMLESRAQLPVHSACETILFEVNRSPVT
LIRGETGCGKTTQVPQFLLDQMINAGLGANCNIIVTQPRRISAVSIAERVAAERSECLGN
SVGYSVRFESVMPRAYGSILYCTVGTLLRRLEGGLRGVSHVIVDEIHERDINTDFLLVLL
RDMVRVYKELRIILMSATVDTTLFTDYFGDVAIVEVYGRTYPVQEYYLEDIIEMLNFRPP
PEDKRKKHEDDDDGGEGDDENCNKIIAPGYAESTKIAMSQLSEKEIPFELVETLLRYIKG
LGVPGAVLFFLPGWNLIFMLHKHLEQSPEFGSSRYRILPLHSSIPREDQRRVFEPVPPGV
TKIILSTNISETSVTIDDVVYVIDSCKVKMKLFTSHNNMTNYATVWASKTNLEQRRGRAG
RVRAGFAFHLCSKARFEKLEQHATPEIFRTPLHELALSIKLLRLGPIGMFLAKAVEPPPI
DAVIEAEVMLRAMRALDANDELTPLGRLLAKMPIEPRLGKMIIYGCIFYVGDAMCVIAAS
TTFPEPFIVPTDRRRLGWMHKNLAGNRASDHVALLNAFQMWEDARSGGERDEISFCENKL
LNMQTLRMTWEAKNQLRDILINGGFPEECLLPQSFNFTGPDNKLDIAITLLCLGLYPNVC
YHKEKRKVLTQEFKPALVHKSSVNCSNFTIEFPSPFFIFGEKIRTRAVSCKQMTNISPVQ
LLLFGPRSVCRQGEEVIMDGWLNLKMEFLQAAKVVALRPPLEALIVRATKNPEGVATPGP
QEETLMALVRALSRPQAGRHGLEQKGVSPYRNNPPPKMARSDGFRGGRLGGYGSGFGAGS
TGFGAGRGGGGYGSGLGRGYGGGFGGRDGGGFAERSGSGFGGGYGGGFGGRDRGGFGGRD
GGGFAERSGSGYGGGFGSGAGVDRSGGGYGGESDDGYGGGYGGASGGGYGGASGGGYNVA
SGGGYGGSSGGGFGGSLVQGGRGGYGGGNYGRFNTGGGDSFNSKGSFGGRLSDGFDSGYN
YDRQSSGFGTEGIGGFGDESNWRGPSSLTGGNGNAGGYSQYRGGDYGGGY
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaagcaagttctgtatagttggtgtggtaaaaataaagttggaactccaaat
tatgagttttcagtgggcggtccaaaacacagacagcgatttaaatgtgaggtgcgcctg
gaaaattttgactatgttggagtcggaaattctacaaacaaaaaagattctcaagccaat
gctgcgaaagacttcattcagtatttagtacgaattggtaaaataaaaacagatgaagta
ccgccgaatttattaggtgcagccatacttgagcaaacattagagcaagatcaaatagat
ggtgattcaaaggacaagtgtggctctagtggcatcctgcctggtggcactttggcacct
catttgagattacaagctgatggtattggacaagaagttggtgcacccagagaattccca
ccataccagaggggcccacccctagcatacatggatagaattgcagagaagagaaaactg
gaagaatctgaggactgtgacttcaatgcagaaattcatggcaactggactatggagaat
gctaagtctcgactacaccagttcctgcaaatgcataaaatcaaagctgactataagtat
catgtgatgggaccagatcataataggagctttgctgctgaaatgtctttttttgtgaag
caaattgggctgaaactccatgccagagagactggttctaacaaacaagtggcctcaaag
tcctgtgccctgtctctggtcagacagttgtaccacatgaaagtgattgagcccaatact
ggccagaagaagaagaaaggcacagagaagctaccaccctatgaagtcaatattggagaa
gaactggaaatgaaaattgatcaatgtctaaaacaatggggagtagagccagtgacctat
tttgagcctactgaacagaacagctcaaatgaaggggagccggaggcaccctcacctgtg
acactcatcaatcatcccagcttggaagagtttgacccagcgccagctaaaaacacacct
ggtgtagtatcctggtctcctcctcaacctaattggaatccttggagtaattgtaacata
gatgaaggtcctttggcttcagccagtctagatcagatcagtaaggatttgaaaatggct
ttacagatacagtatgctgaagatgaaaacctaaagaaaatgctggaaagtcgggcccaa
ttgccagttcattcagcttgtgaaaccattctgtttgaggtgaacagaagtcctgtcaca
ttgatccgtggagaaactggatgtggcaaaacaacacaggttccacaatttttgttggat
cagatgatcaatgcaggtcttggcgccaattgcaatataattgtcacacagcccagacgt
atcagtgcagtatccatagctgagcgtgttgcagctgagaggtcagagtgcctcggtaac
tctgtaggctacagtgttaggtttgagtctgtaatgcctagagcctatggcagtatactc
tactgcactgttggaacattgttgcgacgcttagaaggaggtcttaggggcgtatcacat
gtcatagttgacgagattcatgaaagggacataaatactgacttcctgctggtgttactg
cgtgatatggtcagagtgtacaaggaacttagaattattctgatgtctgctacagttgac
acaactctcttcactgattactttggggatgtggccattgtggaggtatatggcaggaca
taccctgtacaagagtactatttggaagacatcattgagatgttaaacttcagaccaccc
cctgaagataaacgaaagaaacacgaggatgatgatgatggaggagaaggagatgatgaa
aattgcaataaaatcatagcacctggctatgctgagtctacaaagatagccatgtctcag
ttgtcagaaaaagaaattccatttgaacttgttgagactctgttgagatatataaaagga
cttggagttccaggagcagttttatttttcttgccaggatggaatctcattttcatgctt
cataagcatctggaacaaagcccagagtttgggagttcaaggtataggattttacctttg
cactcttccattccacgtgaagatcagagacgtgtctttgagcctgttcctcctggtgtc
actaagatcattttgtcaaccaacatatcagaaactagtgttaccattgatgatgttgta
tacgtaatagactcttgcaaagttaagatgaagctgtttacatcccataacaacatgacc
aattacgccactgtgtgggccagcaaaaccaatttagagcagagacgaggtcgtgcaggc
cgtgtcagagctggttttgctttccatttatgtagcaaggccagatttgaaaagctagag
cagcatgctactccagaaatcttccgcaccccactacatgagttggctctgtctataaaa
cttctcaggcttggacccattggtatgttcttggctaaagctgttgaaccccctcccatt
gatgcagtcatcgaggctgaggtcatgctaagagctatgagagctctagatgctaatgat
gagcttacacctttgggaagactgttggccaaaatgcccatagagccaagacttgggaaa
atgattatctatggatgcattttttatgttggggatgccatgtgtgttattgcagccagt
accacattccctgagcctttcatcgtcccaactgaccgtcgaagactgggctggatgcac
aaaaatttggcagggaacagggccagtgatcatgtggcattgttgaacgccttccagatg
tgggaagatgctaggtcaggtggtgagcgggatgaaatcagtttctgtgagaataaattg
ttgaacatgcagacgctgcgcatgacctgggaggctaaaaaccagctgcgagatattctg
atcaatggtggctttcctgaagaatgtttactgcctcaaagctttaacttcactggcccg
gacaataaactggacattgccatcactcttctttgtctgggactgtatcctaatgtttgc
taccacaaagagaaacgtaaagtcttaacccaagagttcaaacctgctctagttcacaag
tcatctgttaactgcagtaattttaccattgagttcccatctccattctttatatttggt
gaaaagatacgtacacgggcagtatcctgcaaacagatgacaaacatctcacctgtccag
ctgctgctgtttggtcctaggtctgtgtgtcggcaaggagaggaggtcattatggatggc
tggctgaacttaaagatggagtttctacaggcagctaaagttgtcgcactcaggccccca
cttgaagcccttattgtcagggccactaaaaatccagaaggtgtggccacacctggtcct
caagaggagactctgatggctcttgttcgagcattgtctaggccacaggcagggcgtcat
ggtcttgaacagaaaggagtaagtccctatagaaacaaccctccaccaaagatggctcga
tctgatggtttcagaggaggaaggcttggaggatatggctctggctttggtgcaggctct
actggatttggtgctggaagaggtggtggtggatatgggagtggattagggcgtggctat
ggtggtggatttggtggaagagatgggggtggatttgctgagagatctggtagtggattt
ggaggtggctatggtggtggatttggtggaagagataggggtggctttggtggaagagat
gggggtggatttgctgagagatctggcagtggatatggtggaggatttggaagtggagct
ggtgttgacagaagtggtggtggatacggtggagaatctgatgatggatatggaggtggg
tatggtggagcctctggaggtgggtatggtggagcctctggaggtggatataatgttgca
tctggaggtggatatggcggatcctctggaggtggatttggtggaagtttagtccaagga
ggtagaggaggatatggtggtggcaactatggaagattcaacactggtggtggggacagt
ttcaatagtaaaggaagttttggaggaaggttgagtgatgggtttgacagtggatacaat
tatgacagacagagctcggggtttggaactgaaggaatagggggatttggggacgagagt
aactggagggggccatcttctctaactggtggcaatggaaatgcagggggctattctcag
tacagaggtggagattatggtggagggtattaa
DBGET
integrated database retrieval system
