Biomphalaria glabrata (bloodfluke planorb): 106067471
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Entry
106067471 CDS
T07368
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106067471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106067471
Spliceosome [BR:
bgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106067471
Complex C
U5 SnRNP specific factors
106067471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
EFG_IV
EFG_C
GTP_EFTU
GTP_EFTU_D2
EFG_III
EFL1
Beta-barrel_INTS6
Motif
Other DBs
NCBI-GeneID:
106067471
NCBI-ProteinID:
XP_013082103
UniProt:
A0A2C9JTD6
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDDGDEEEEEEQDEDDDYVDRDDEDDMDQDEAENPAEMQVVL
HEDKKYYPTPEEVYGPDVETIVQEEDTQPLTEPIIAPIKNKKFSMVEQDLPTTTYNMEFL
ADLMDCPNLVRNVTLCGHLHHGKTSFIDCLMEQTHPEIVGDYDSDMRYADTLFTEQERGV
SIKSTPVTLVLPDTKAKSFLLNIMDTPAASINTTAPSLILKAAMMLNTERLIKHAMQERL
SLTICINKIDRLILELKLPPADAYFKLRQIIDEVNAIIGLYAEDDPNQMVSPILGNVCFA
SSYYRFCFTLKSFAKIYADTYDGINEKEFGRRLWGDLYFNSKTRKFTKKPATSSSPRSFV
EFILEPLYKIFSQIVGDVDESLPRVCDELGIHLSKEEQKLNIRPLLRLVCKRFFGDFTGF
VDMCVDHIPSPVENAKRKIEHIYTGPMDSDLAEEMIQCEAEGPLMIHTTKLYPTEDGTSF
HVFGRVISGTLYASQEVRILGENYTLQDEEDSRLGQVGRLWIAEARYKIEVNRVSCGNWI
LIEGIDQPIVKTSTIVDVSGHEEVYIFRPLKFNTASVIKIAVEPVNPSELPKMLDGLRKV
NKSYPLLTTKVEESGEHVVLGTGELYLDCVMHDLRRMYSEIDIKVADPVVAFCETVVETS
SLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEIVQITWPRKKLGEFFQTKYDWDLLAAR
SIWAFGPDTTGPNILVDDTLPSEVDKNLLVTVKDSIVQGFQWATREGPLCDEPIRNVKFK
ILDASIAQEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYLFVQVMAPADCVSAVYTVL
AKRRGHVTQDAPVPGSPLYTIKAFLPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGD
PLDKSLHIRPLEAQPANYLAREFMIKTRRRKGLSEDVSINKFFDDPMLLELAKQDVMLNY
PI
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatttgtatgatgagtttgggaactacataggccctgagttagacagtgat
gatggggacgaggaggaagaagaggaacaagatgaggatgatgactatgttgacagggat
gatgaagatgacatggatcaagatgaggcagagaatccagcagagatgcaggtagtcctc
catgaagataagaagtactacccaactccggaagaggtgtatggtcctgatgttgagact
attgtacaagaagaagacacacagcctctcactgagcccataatcgctccaatcaagaat
aaaaaattcagtatggtagaacaagacttgccaactacaacatacaacatggagttttta
gctgatctcatggattgtcctaatctagttcgcaatgtcacactctgtggacatctccac
catggtaaaacttcctttattgattgtttaatggaacaaactcatccagaaattgttgga
gattatgattcagatatgaggtatgctgacaccctgttcacagagcaagagcgtggagtg
agcataaagtcaacgcctgttactcttgttttgcctgacacaaaagcaaaatcatttctt
ttaaatataatggacaccccagctgcatcaataaatacaacagctccatcactgattctg
aaagcagctatgatgttgaacacagaacgcttgataaagcatgccatgcaagaaagacta
tcactgaccatttgtatcaacaagattgataggcttatacttgaactaaaattacctcca
gctgatgcctactttaaactaagacagattattgatgaagtcaatgctataattggtctt
tatgctgaagatgatcccaatcaaatggtgtcccctatcttgggcaatgtttgttttgct
agctcctactacagattctgcttcacactaaaatcatttgccaaaatatatgcagacaca
tatgatggaataaatgaaaaggaatttggaagaaggttatggggtgatttgtactttaac
agcaaaacacggaagttcacaaagaaacctgctacttcctcttcaccacgcagttttgtt
gagttcatactggaacctttgtacaagatattttctcagattgttggtgatgttgatgaa
agcttaccaagggtgtgtgatgagttgggcatacatctatccaaagaggaacaaaagctc
aacattcgtccactgcttaggctggtgtgcaagagattttttggtgactttacaggtttt
gtggacatgtgtgttgatcacatcccctcacctgtggagaatgcaaagagaaaaatagaa
cacatttacactggaccgatggactctgatttggcagaagagatgattcagtgtgaagct
gagggcccattaatgattcataccactaaactatatccaactgaagacggcacaagtttt
catgtatttggtcgagtgataagtggcacactctatgctagccaggaagtgagaatcttg
ggagaaaattatacattgcaagatgaggaggactcaaggctgggacaggttggaaggtta
tggattgctgaggccagatataaaattgaagtaaatagagtctcatgtggaaactggata
cttatcgaaggaattgatcaacctattgtgaaaacatccactattgtagatgtttcagga
catgaagaggtgtatatcttccgtccattaaaatttaatactgcctcagtgatcaagata
gccgtagagccagtcaacccttcagaactaccaaaaatgttggatggtttacgtaaagtt
aacaagagttatcctttacttaccacaaaagttgaagaatctggagagcatgtagtgttg
ggaactggtgaactttacttagattgtgtcatgcatgatctgcgcagaatgtactcagag
attgatatcaaagtggctgatccagttgttgcattttgtgaaactgttgttgaaacatca
tctctgaaatgttttgctgaaacacccaacaaaaaaaacaaattaacaatgatagccgag
ccattggagaaaggtcttgcagaagatattgaaaatgaaatcgttcagatcacttggccc
agaaagaaactgggggaatttttccagacaaaatatgactgggatctcctggctgctcgt
tccatttgggcatttggtccagacactacaggcccaaatattcttgttgacgacacactt
ccttctgaggttgacaaaaatcttttagtgacagtaaaagacagtatagtgcaaggcttc
caatgggcaactcgagaaggacccctgtgtgatgaacccattcgcaatgtgaaatttaaa
atcctggatgctagcattgcccaagaacctattcatagaggaggtggacaaatcattcct
acagcaagaagagttgcgtactcagcttttctcatggcaactcctagaatgatggaaccc
tatttatttgttcaagtcatggcacctgctgactgtgtctctgcagtctacactgtttta
gctaaaagaagaggtcatgtgacccaagatgctccagtaccaggctcacctctgtatacc
atcaaagctttccttcctgccattgattcctttggttttgagacagatttgaggacacac
acacagggacaagcattttgcctttctgtctttcatcattggcagattgtgcctggtgat
cctctagacaagtctctgcacatcagacctctggaagcccagcctgctaactatctggcc
agagagtttatgattaaaacaaggaggagaaagggcctaagtgaagatgtcagcattaac
aaatttttcgatgaccctatgttgttggagttggccaaacaagatgtaatgctcaattac
cccatctag
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