Biomphalaria glabrata (bloodfluke planorb): 106078793
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Entry
106078793 CDS
T07368
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein-like isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106078793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bgt04131
]
106078793
Membrane trafficking [BR:
bgt04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
106078793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
106078793
NCBI-ProteinID:
XP_013095261
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MFGEYAQIATYLQQTRDGAPQTAQECLPPYLCPTYSPPQLYNFGREKKNNFEDFILIAEF
SELEGPKPVMTIPKEGGAHIDQNAFAVKILAVDFQTSSEGFSITEDAQVLISDTELGIHA
FVHHLILYDNTARGFVRPYCITYITTEQRKLLHFYEDISLQFKKAARYLKYGNKIVFVGD
LERHLKDLEHTKGYLLNQVSKMRLKDDLNENQVNEARKNAENEMYRTLQTIRQSSTEIKE
IISILKPLLNDRRLEAKFRELEDKAFQQTTQAGEDKLSLQDNWFNDLSSIEECDLRSGSL
NESKVSPLTLFKPRDYKPLLVETKKAKRFNAPLRGLHELCSWGAKEGLKKFRNIHDHFKK
EAMVLDLERNESRMLRPRCTSLSHGHCVTGNFLSDVYMKNVPNCVTNEFEGWSMYSGHQW
GSSASLESLDSFKSADDGSLLSLNTFNSAESIHSFLALDISLLAETEYYPDVENFNDINV
DKNGPDTSGSPRVSGKSSLKSNLSMLSICKTSDLDFTDSQTIVEDDSEYLFSEKNLVEVN
TKLESSTASLSSHTFPKASQCSNIDISSIRETSDVSTHLDSLPNVNSHQVITFKNIMSDK
TNHIKCISIPLDIDDSSSIPSDISVNEMNSLESNNTQSALSPSYSDKQFTEEQVTFRENF
CKSDVPEIKGDGKSKLSTLLDEEDNSKHYVKPGLQFGPFSIASVEEISSVSLTPSSDSYQ
TPSDYGCSFLKLPNGIPANMSQLAQELNGLRNDYVSKFYVEEDDTARYRAESDTSSAFTE
ISLRDLFSYRDNASDHNKNHQLQTGKDISDGISKGKQFYEDVDSPVSCASIWKPRCRLYT
LGEWISNSSIGKPGSCILEVLSSYQNLHHIIYSLLSGRPVLIAASVRLEQEVIKLVRALT
IFVPMTKRKRQNVLEWTSKPLSIVDLAKLKLVGICRPDKRSLDSFIPCAVKKTCSIVDLE
KRVIIASPYQGFYISAMMSKRKLFKTDVQYLSYIHWWLMELAAKAFLFFHSFCLSSTGSI
LYSLSPRDQHDPYSTTEKTESTIMTKLGIRDCDCEIIQHFSELVKLAKIESKICHGTDSG
SIVYPFNIQHKVCQTYRC
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagaatatgctcaaattgcaacttacttacaacaaactcgtgatggtgctcca
caaacagctcaagaatgcttgccgccatatttgtgtcctacttacagcccacctcaactg
tacaactttggacgagaaaagaaaaataattttgaagattttatattgattgcagaattt
tctgaattggaaggtcccaaacctgtgatgaccattcctaaagaaggcggagctcatatt
gaccagaatgcatttgcagtaaaaatattagcagtagattttcagacctcatctgaaggt
ttttctataacagaggatgcccaggttttaatttcagatacagaactaggcatccatgca
tttgtacatcatttaattttatatgataacacagcccgaggatttgtaagaccttactgt
attacttacataactacagaacaaagaaagctgttacatttttatgaagacatttcctta
cagtttaaaaaggcagcaagatatttgaaatatggcaacaaaattgtgtttgttggagat
ttagagagacatttgaaagatttagagcacacaaaaggatacttattaaatcaagtctca
aagatgagactgaaagatgatttgaatgagaaccaagtaaatgaggctagaaaaaatgct
gagaatgaaatgtaccgaactctacagacaataagacaatccagtactgaaattaaagaa
attatttccattttgaaaccattattgaatgatagaagattagaggctaagtttagggaa
cttgaagacaaggcatttcaacaaactacacaggcaggagaagataaacttagtttgcag
gacaactggttcaatgatttatcatccattgaagaatgtgatttaagaagtgggtcttta
aatgaatcaaaagtctctcctttgacactcttcaaaccaagagattacaaacccttgctt
gttgaaaccaagaaagctaaacgattcaatgcaccattgagaggtcttcatgaattgtgt
tcttggggagccaaagagggtctaaaaaaattcagaaatatacatgatcattttaagaag
gaagcaatggttcttgatttagaaagaaatgaatctagaatgttgcgtcctagatgcact
tcactatcccatggtcattgtgtcacaggaaactttctctcagatgtttatatgaagaat
gttcctaactgtgttactaatgagtttgagggctggtcaatgtattctggacaccaatgg
ggaagttcagcctctttggaatccttggatagttttaaatcagctgatgatggatctctt
ttatctttaaatactttcaacagtgctgaatctattcattcatttcttgctttggatatt
agccttttagcagaaacagaatactatccagatgttgaaaatttcaatgacatcaacgta
gacaaaaatgggccagacacttcaggatcacctcgtgtgtcagggaaaagtagcttgaag
agtaatttatctatgttaagcatttgtaagacatctgaccttgattttactgacagtcag
acaattgtggaggatgattcagaatatttattttctgagaaaaatctagttgaggtgaat
accaaattggagagttccactgccagtttatcaagccacacatttccaaaggcttcacaa
tgttcaaacattgatatctctagcattagggagacgtctgatgtttctactcatttggac
agtctccctaatgtgaactctcatcaagtcatcacatttaaaaacatcatgtcagataag
acaaatcatattaaatgtatatccatacctttagatattgatgacagttcaagtatacct
agtgatatttctgtaaatgagatgaactcactggagtctaacaatacacaatctgctctt
tctccaagttatagtgataagcagtttacagaggaacaagtcactttcagagaaaatttt
tgtaagtcagatgtgcctgagatcaagggagatggtaaaagtaaattgtcaaccctgcta
gatgaagaggataattcaaaacattatgtcaaacctggcctccagtttggcccattcagt
atagcatcagtagaagagatctcatcagtatcacttactccatcaagtgatagttaccaa
actccttcagattatgggtgttcattcttgaagttacccaatggtattccagcaaacatg
tcccagttagcacaggaattaaatggattgaggaatgattatgtttctaagttctatgta
gaagaggatgacactgcccgatacagagctgagtcagatacctcatctgcttttacagag
atttctcttcgagaccttttttcttatcgtgacaatgcttctgatcacaataaaaatcat
cagctacagactggaaaagatatatctgatggcatcagcaaagggaaacaattttatgaa
gatgtagacagtcctgtttcttgtgctagcatttggaaacctcgatgtagactctataca
cttggagagtggataagtaattcaagcatagggaaaccaggcagttgtattttggaggta
ctttcatcttatcaaaacttacatcacatcatctatagtctgcttagcggacgtccagtg
ctgattgctgcaagtgtcaggctagaacaagaagtcatcaaactagttagagctttgaca
atatttgtgcctatgacaaaaaggaaacgtcagaatgttttagaatggacgtctaaacca
cttagtattgtagacctagctaaactaaagcttgttggcatctgtagacctgataaaaga
tctctagattcatttataccatgtgctgttaagaaaacatgcagtatagttgatcttgaa
aaaagagttattatagcatctccttatcagggcttttatatctctgctatgatgtctaaa
agaaaattgtttaaaactgatgtgcaatatttatcttacattcattggtggcttatggaa
cttgctgcaaaagcttttctcttttttcattcattttgtttaagttctactggcagcata
ttatactctctgagtcctagggaccaacatgacccatactctacaacagaaaaaacagaa
tcaactattatgacaaaacttggcatcagagactgtgattgtgaaatcatacagcatttt
tcagaattagtgaaactggcaaaaattgaatctaaaatttgccatggtacagattcagga
agcattgtttatccatttaacattcaacacaaggtgtgtcaaacatatcgctgctaa
DBGET
integrated database retrieval system
