Brachybacterium halotolerans subsp. kimchii: Bra3105_00590
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Entry
Bra3105_00590 CDS
T08518
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bhh
Brachybacterium halotolerans subsp. kimchii
Pathway
bhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bra3105_00590 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhh03021
]
Bra3105_00590 (rho)
03019 Messenger RNA biogenesis [BR:
bhh03019
]
Bra3105_00590 (rho)
Transcription machinery [BR:
bhh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bra3105_00590 (rho)
Messenger RNA biogenesis [BR:
bhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bra3105_00590 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
UEJ82863
LinkDB
All DBs
Position
127310..129400
Genome browser
AA seq
696 aa
AA seq
DB search
MNDTTAPQGDSTSLAAKKLPELQQIAAGLGIKGARRLRKGDLIDAINGGGSSAPKTTAPK
STAPTESAPEATASTSAAAGETAPQKAATTSGASEGSASSADVLDLGLDLSTQDERGTGG
RQERRGREDRQGRNERNERNERNERAERSDRSERQERGDQGEGRQRGDRQDRGDRQDRGD
RQDRQDRGDRAGRENRKDRDNRKDSNDRNDHGDQGGRGSRPRLEDIELPDRTGEDSDMSR
NDQGGRGGRGDSEDGRNRRSRNRSRDRKRRGRNGGDNPQQDGGGSEDEQQVREGEELVSV
AGILDVRDNNAYVRTTGYLPGASDVYVSMNMVRKSGLRKGDAITGLVRAPKDGEEQRQEQ
PQQGGGRNRRNRGGNQQGKYAPLLQVDTVNGLTPDRARQRVDFGKLTPLYPDERLRLETA
PNAVAPRIIDLVSPIGKGQRGLIVAPPKAGKTIIMQQIANAITTNNPEAHLMVVLVDERP
EEVTDMQRTVKGEVIASTFDRPASDHTIVAELAIERAKRLVEMGKDVVVLLDSLTRLSRA
YNLAAPASGRILSGGVDASALYPPKRFFGAARNIENGGSLTILASALVETGSKMDEVIFE
EFKGTGNMELRLSRNLADKRIFPAVDVNASSTRREEELMGKEELAIMWKLRRVLGALDQQ
QALELLLERVKKTQSNTEFLMTVSKNTPSVGGRSGD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacaccaccgcaccgcagggcgacagcacgtcgctcgcggcgaagaagcttccc
gagctgcagcagatcgctgccgggctcggcatcaagggggcgcgtcgcctccgcaagggc
gatctcatcgacgcgatcaacgggggcggctcctccgccccgaagaccacggccccgaag
agcaccgctccgaccgaaagcgcgccggaggccaccgcgtcgacgtccgcggcagcgggc
gagaccgccccgcagaaggcggcgacgacgagcggagcctccgagggctcggcgtcgtcg
gccgacgtcctggacctgggcctggatctgtccacgcaggacgagcgcggcacgggtggg
cgccaggagcgccgcggccgcgaggaccgtcagggtcgcaacgagcgcaacgagcgcaac
gagcgcaacgagcgcgcggagcggagcgatcgctccgagcgccaggagcgcggcgaccag
ggcgagggccgccagcgcggcgaccgacaggatcgcggcgaccgtcaggaccgcggcgac
cgacaggatcgccaggaccgcggcgaccgtgcgggccgcgagaaccgcaaggaccgggac
aaccgcaaggacagcaacgaccgcaacgaccacggcgatcagggcggacgcgggtcgcgt
ccccgtctcgaggacatcgagctgcctgatcgcacgggtgaggactccgacatgagccgc
aacgaccagggcggccggggcggccgcggagactccgaggacggtcgcaaccgccgctcc
cgcaaccgctcgcgcgatcgcaagcgccgcggccgcaacggcggcgacaacccgcagcag
gacggcggcggcagcgaggacgagcagcaggtccgcgagggcgaggagctcgtgagcgtc
gccggcatcctcgacgtgcgcgacaacaacgcctacgtgcgcaccaccggctacctgccc
ggcgcgagcgacgtctacgtctccatgaacatggtccgcaagagcggactgcgcaagggc
gacgcgatcacgggcctcgtgcgggcgcccaaggacggcgaggagcagcgccaggagcag
ccgcagcagggcggcgggcgcaaccgccgcaaccgcggcggcaaccagcagggcaagtac
gccccgctgctgcaggtcgacaccgtcaacgggctcacccccgatcgcgcccgtcagcgc
gtggacttcggcaagctcaccccgctctacccggacgagcgcctgcgcctggagaccgcc
cccaacgccgtcgcgccgcgcatcatcgacctcgtctcgccgatcggcaagggccagcgc
ggcctcatcgtcgcgcccccgaaggccggcaagacgatcatcatgcagcagatcgcgaac
gcgatcaccacgaacaaccccgaggcccacctcatggtcgtgctcgtcgacgagcgaccc
gaggaggtcaccgacatgcagcgcacggtgaagggcgaggtcatcgcctcgaccttcgac
cggcccgcctcggaccacacgatcgtggccgagctcgcgatcgaacgcgccaagcgcctc
gtggagatgggcaaggacgtggtggtgctgctggattcgctcacccgtctctcgcgcgcc
tacaacctggccgccccggcctcgggtcgcatcctctccggcggtgtcgacgcctcggcg
ctctacccgcccaagcgcttcttcggcgccgcacgcaacatcgagaacggcggctcgctc
acgatcctcgcctcggccctggtggagaccggttccaagatggacgaggtcatcttcgag
gagttcaagggcaccggcaacatggagctgcgcctctcgcggaacctcgcggacaagcgc
atcttcccggcggtggacgtcaacgcctcgagcacccgccgcgaggaggagctcatgggc
aaggaggagctggccatcatgtggaagctccgccgcgtcctcggcgccctcgatcagcag
caggcgctcgagctgctcctggagcgcgtgaagaagacccagtcgaacaccgagttcctg
atgacggtctccaagaacacccccagcgtgggcggccgctccggcgactga
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