Brachybacterium halotolerans subsp. kimchii: Bra3105_00850
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Entry
Bra3105_00850 CDS
T08518
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhh
Brachybacterium halotolerans subsp. kimchii
Pathway
bhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bra3105_00850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhh03019
]
Bra3105_00850
03400 DNA repair and recombination proteins [BR:
bhh03400
]
Bra3105_00850
Enzymes [BR:
bhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bra3105_00850
Messenger RNA biogenesis [BR:
bhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bra3105_00850
DNA repair and recombination proteins [BR:
bhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bra3105_00850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HTH_IclR
AAA_30
Dimerisation
Pribosyltran
MarR_2
RecQ_Zn_bind
Rrf2
GxGYxYP_N_2nd
Motif
Other DBs
NCBI-ProteinID:
UEJ82914
LinkDB
All DBs
Position
complement(186149..188413)
Genome browser
AA seq
754 aa
AA seq
DB search
MTASAAETHPQLHAEALEALRDLTGRADAAFHPGQFDAIAALVDEHRRALVVQRTGWGKS
AVYFLAALLQRRRGAGPALIVSPLIALMRDQVAAAARAGVRAEAISSANPTAWTQIEQSL
AADEIDVLLVSPERLVNPRFRDEQLPRLIDRCGLLVIDEAHCISDWGHDFRPDYRRLRDL
VAQLGQQVPVLATTATANSRVVADVEEQLGVVAQGAPTRDTADTAPTGEDPGVLTLRGPL
TRDSLRLGCLSLPDDRARLDYLVRHLNAFEGSGIIYTLTVSAAEDLAALLNTPERPVRAY
TGRTDAEDRAQLEADLKDNRIKALAATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGR
AGRATDSADVLLLPGREDRAIWEYFATASMPSQDSASQVLTALAEAGSPLSTAAIEARVD
VRRAALELLLKVLAVDGAVEAVKGGWIATGHPWEYDAERYENVARTRREEQQAMLAYERL
GSEGTGPDVVASDPAQCRMVFLARQLDDTTAVPCGRCDVCAGSWYPSADAPAGAADAQVS
ALLDRVGVPVEPRKQWPQGLDQLHMRGLQGAAPKGKIAEGERCEEGRVIARMSDLGWAVP
LRSLLRTDEDGGRIDSPVPRNIGSRIIEVLKEWDWQQRPVGVVAIPSTTRPELVGSLASG
IASIGRLQDLGPLGLAADAAPLSGARNSAFRVAALWDRFVITPELQQQIDALAGAPILLV
DDVIDTRWTMTIAARLLRRAGSGPVLPLALAQEA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgagtgccgccgagacccatccgcagctgcacgccgaggccctcgaggccctg
cgcgacctcaccggcagggccgacgccgccttccatcccggccagttcgacgcgatcgcc
gcgctcgtggacgagcatcgccgagcgctcgtggtccagcgcaccggctggggcaagtcc
gccgtctacttccttgccgccctgctgcagcgccggcgcggtgcgggcccggcgctcatc
gtctccccgctcatcgccctcatgcgcgaccaggtcgcagctgccgcccgagccggagtg
cgcgccgaggcgatcagctcggcgaacccgacggcctggacccagatcgagcagtccctc
gcggccgacgagatcgacgtgctcctggtctcccccgagcgtctggtcaacccccgcttc
cgcgacgagcagctcccccgcctgatcgaccgctgcggcctgctggtgatcgacgaggcg
cactgcatctccgactggggccacgatttccgtcccgactaccggcggctgcgcgatctc
gtcgcccagctcggccagcaggtgcccgtgctcgccacgaccgcgacggcgaactcccgc
gtggtcgccgatgtcgaggagcagctgggggtcgtggcgcagggagcgccgacgagagac
acagcagacacggcaccgacgggcgaggatcccggagtgctcactctgcgcggccccctc
acccgcgactcgctgcgcctgggctgcctctccctgcccgacgaccgcgctcgcctggac
tacctggtgcgacacctcaacgccttcgagggctccggcatcatctacacgctcacggtc
tccgcggccgaggacctcgccgccctgctgaacacccccgagaggcccgtgcgcgcctac
acggggcgcacggacgccgaggaccgggcgcagctcgaggcggacctcaaggacaaccgg
atcaaggcgctcgccgcgaccagcgccctgggcatgggcttcgacaagccggacctcggc
ttcgtcatccacctgggcgccccgagttcccccgtcgcctactaccagcaggtgggacgc
gcgggccgcgccacggacagcgcggacgtcctgctgctccccggccgtgaggaccgcgcg
atctgggagtacttcgcgaccgcctccatgccctcgcaggactccgcctcccaggtcctc
accgctctcgccgaggccggctccccgctcagcaccgcggcgatcgaggcgcgcgtcgac
gtgcgccgcgccgccctcgaactgctcctgaaggtgctcgcggtcgacggcgccgtcgag
gcggtcaaggggggttggatcgcgacgggccacccctgggagtacgacgccgagcgctac
gagaacgtggcccgcacccgccgcgaggagcagcaggcgatgctcgcctacgagcggctg
ggctccgaggggacgggccccgacgtcgtcgcctcggatcccgcgcagtgccgcatggtg
ttcctcgcccgccagctcgacgacaccacggcggtcccctgcggccgctgtgacgtgtgc
gcgggatcctggtacccgtcggccgacgccccggcgggggcggccgacgcccaggtctcc
gccctcctggaccgcgtcggcgtgcccgtcgagccacgcaagcagtggccccagggcctc
gaccagctgcacatgcgcgggctccagggcgccgcccccaaggggaagatcgcggagggc
gagcgctgcgaggagggccgcgtgatcgcccgcatgtccgacctaggctgggcggtcccg
ctgcgcagcctcctgcgcaccgacgaggacggcgggcgcatcgactcccccgtcccccgg
aacatcggctcgcggatcatcgaggtgctcaaggagtgggactggcagcagcgccccgtg
ggcgtcgtggccatcccctccacgactcgcccggaactcgtggggtcgctcgcctcgggc
atcgcctccatcggcagactgcaggacctcggccccctcggtctcgccgccgacgccgcg
cccctcagcggtgcccgcaacagcgccttccgcgtcgccgccctctgggaccgcttcgtg
atcacccccgagctgcagcagcagattgacgcactggccggcgccccgatcctgctcgtg
gacgacgtgatcgacacccgctggacgatgacgatcgccgctcggctgctgcgccgcgcg
ggctccgggccagtgctgccgctcgcgctcgcacaggaggcgtga
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