Brachybacterium halotolerans subsp. kimchii: Bra3105_03385
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Entry
Bra3105_03385 CDS
T08518
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bhh
Brachybacterium halotolerans subsp. kimchii
Pathway
bhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bra3105_03385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhh03019
]
Bra3105_03385
03009 Ribosome biogenesis [BR:
bhh03009
]
Bra3105_03385
Enzymes [BR:
bhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bra3105_03385
Messenger RNA biogenesis [BR:
bhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bra3105_03385
Ribosome biogenesis [BR:
bhh03009
]
Prokaryotic type
rRNA helicases
Bra3105_03385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UEJ83380
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All DBs
Position
745284..747206
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AA seq
640 aa
AA seq
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MNEARPSAADPTPEAPASDEPNGPAADSATEAPSAPEAPATPEAPAEPTFADLDLPRVLQ
GAVDRLGFTTPSPIQSEAIPQLLAGRDVIGVAQTGTGKTAAFGLPMLTAVDPSERAAQAL
VLAPTRELAMQVAEAISTFAQDVDGLSVTSVYGGSPYGPQERALSRGTQVVVGTPGRVID
HLKRGNLHLETLRYLVLDEADEMLRMGFAEDVDEILSHAPQSKQVALFSATMPPAIQRVA
EEHMSDPVRVSVSRQASTTTNVSQRYAVVPFRHKTGALARVLATSDAEAAIVFVRTRSAA
EEVGTALVSRGVVAATISGDVPQKEREKIVERLREGSLQVLVATDVAARGLDVDKIGLVV
NFDVPGEPEAYVHRIGRTGRAGRTGEALTFVAPHERRKLRAIEKTTRQTLQEISIPSPRD
VSAHRTEKLLASVPERAERGRLDLYLEKVDAFLASSGMEPRMLAAVLAATAVGDDGPGAE
VEGDEEFTGAHLKGSDRDRESDGKGRPAPGQPEKGFTSYRVSVGHSHGAKPAAIVGAITG
EGGLNGKSIGKIDIFGSFSLVQIRGSLKDDQIDRIGHAKIAGRTLRISEDRGPRTGGRRE
HGSRRPDSREGGRHEGGRRFGGPRREGGPRRDSGRAHGGR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcacgcccctccgccgcagatcccacacccgaggcccccgcgtccgacgag
ccgaacggcccggccgcggactccgcgaccgaggcgccgtcggcccctgaggcccccgcc
acccccgaggcccccgcggagccgaccttcgccgacctcgacctgccgcgcgtgctgcag
ggcgcggtggaccggctcggcttcacgaccccctcccccatccagagcgaggccatcccg
cagctgctggccgggcgcgacgtcatcggcgtggcccagaccggcacgggcaagacggcg
gccttcggcctgccgatgctcaccgcggtcgacccctcggagcgcgcggcccaggcgctc
gtgctcgcccccacccgcgagctcgccatgcaggtcgccgaggcgatcagcaccttcgcc
caggacgtcgacggcctctccgtgacctccgtctacggcggctcgccctacggcccccag
gagcgcgcgctctcccgcggcacccaggtcgtcgtgggcaccccgggacgcgtcatcgac
catctcaagcgcggcaacctgcacctggagaccctcaggtacctggtgctcgacgaggcc
gacgagatgctgcgcatgggcttcgccgaggacgtcgacgagatcctctcccacgccccg
cagtccaagcaggtcgcgctcttctccgcgaccatgccgcccgcgatccagcgggtcgcc
gaggagcacatgagcgacccggtgcgggtctccgtgtcgcgccaggcgagcaccacgacc
aacgtctcccagcgctacgcggtcgtgcccttccgtcacaagaccggcgcgctcgcccgc
gtgctcgcgacctccgacgccgaggcggcgatcgtcttcgtgcgcacccgctcggccgcc
gaggaggtcggcaccgcgctcgtctcccgcggcgtcgtcgccgcgaccatcagcggcgac
gtgccgcagaaggagcgcgagaagatcgtcgagcgcctgcgcgagggctcgctgcaggtc
ctcgtcgcgaccgacgtcgccgcccgcggcctcgacgtcgacaagatcggcctggtcgtg
aacttcgacgtccccggcgagcccgaggcctacgtccaccgcatcggccgcaccggccgc
gcgggacgcaccggcgaggcgctcaccttcgtcgccccgcacgagcgccgcaagctgcgc
gcgatcgagaagaccacgcgccagaccctgcaggagatctcgatcccctccccgcgggac
gtctccgcccaccgcaccgagaagctgctggcctccgtgcccgagcgcgccgagcgcggt
cggctcgatctctacctcgagaaggtcgacgccttcctcgcgagcagcggcatggagccg
cggatgctcgccgcggtgctcgccgcgacggccgtcggcgacgacggccccggggccgag
gtcgagggcgacgaggagttcaccggcgcccacctcaagggctccgaccgggatcgcgag
tccgacggcaagggccgtcccgcccccggccagcccgagaagggcttcacgagctaccgc
gtctccgtgggccactcgcacggggcgaagcccgcggcgatcgtcggcgcgatcacgggc
gagggcggcctgaacgggaagtcgatcggcaagatcgacatcttcggctcgttctccctg
gtccagatccgcggctccctcaaggacgaccagatcgaccgcatcggccacgcgaagatc
gccgggcgcaccctgcgcatcagcgaggaccgcggcccgcgcacgggcggccgtcgcgag
cacggatcgcgtcgacccgactcccgcgagggcgggcgccacgagggcggccggcgcttc
ggcggaccccgccgtgagggcggcccgcggcgcgactccggacgcgcgcacggcggccgc
tga
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