Brachybacterium halotolerans subsp. kimchii: Bra3105_07380
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Entry
Bra3105_07380 CDS
T08518
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bhh
Brachybacterium halotolerans subsp. kimchii
Brite
KEGG Orthology (KO) [BR:
bhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhh03032
]
Bra3105_07380 (topA)
03400 DNA repair and recombination proteins [BR:
bhh03400
]
Bra3105_07380 (topA)
Enzymes [BR:
bhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bra3105_07380 (topA)
DNA replication proteins [BR:
bhh03032
]
Prokaryotic type
DNA Topoisomerases
Bra3105_07380 (topA)
DNA repair and recombination proteins [BR:
bhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bra3105_07380 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UEJ84121
LinkDB
All DBs
Position
1583439..1586201
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AA seq
920 aa
AA seq
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MTGSRHLVIVESPAKARTIARYLGDDYVVEASVGHIRDIPVPRDLPADMKKGPYGKFGVD
VENGFDPYYVVSADKKKTVADLKKKLKDADTLYLATDEDREGEAIAWHLLETLKPKKSLP
VHRMVFHEITRDAIQAALTNTREIDDHLVDAQETRRILDRLVGFELSPVLWRKIRPSLSA
GRVQSVATRLVVERERERMAFVPSDYWDVTGTFAGSDAAFSARIASVDGSRVATGSDFAD
DGTLKQKASAATVLTEESATALVSALEGAQARVASLESKPYTRRPAAPFTTSSLQQEASR
KLRLGARQTMRVAQGLYENGYITYMRTDSVALSGEAISASRAQAAELYGSQYVPEKPRHY
QNKSQNAQEAHEAIRPAGDRFRTPAQVAGQLSGDDFRLYELIWKRTVASQMADAKGTTSS
VELAVEKAGRAATFRASGTVITFRGFMAAYEEGRDASRYGEQDENDKRLPQMDEGDMLDV
EALVPDGHTTTPPPRFTEASLVRALEERGIGRPSTYASTVTTIQDRGYVLRRGSALVPSW
TAFAVVKLLEEHFGPFIDYDFTAQMEEQLDKMARGELGRSEYLDDFYRADGTDGPIGLQP
MVEHQGDIDPREINSIPIGEDITLRVGRYGAYVERPAPVDPDAAPAAPDAEPAPPQRASL
PDDLAPDELTVEKARELLERQKDDGRVLGEDPETGHDVIVKDGRYGPYVTEVLPEDPDDK
TPKSKRPKPRTASLLKSMDLATVDLDDALKLLSLPRVVGADEDGTDITAQNGRYGPYLKK
GTDSRSLETEEQIFSITLDEAKKIYSQPKQRGRAAAKPPLKELGTDPTSEKPIVVKDGRF
GAYITDGTTNVTLRRDDSLDALTHEVAVERLAEKRAKGPAKKGGRSTTRKTTTKSASKST
AKSTTKKAAPKSGSSSTTKS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggctcgcgccatctcgtgatcgtggagtcccctgccaaggcgaggacgatcgcc
cggtacctcggggacgactacgtcgtcgaggcgtccgtcggccacatccgtgacatcccg
gtcccccgcgatctgccggcggacatgaagaaggggccctacggcaagttcggcgtcgac
gtcgagaacggcttcgacccctactacgtggtcagcgccgacaagaagaagacggtcgcg
gacctcaagaagaagctcaaggacgccgacaccctctacctcgccaccgatgaggaccgc
gagggggaggcgatcgcctggcacctgctggagaccctcaagcccaagaagtccctgccg
gtgcaccgcatggtcttccacgagatcacgcgcgacgcgatccaggcggcgctgacgaac
acccgcgagatcgacgaccacctggtcgatgcgcaggagacccgccgcatcctcgaccgg
ctcgtgggcttcgagctctccccggtgctgtggcgcaagatccgcccctcgctctccgcg
ggccgcgtgcagtccgtggcgacccgcctggtcgtggagcgcgagcgcgagcgcatggcc
ttcgtgccctccgactactgggacgtgaccggcaccttcgccggctcggacgcggccttc
tcggcccgcatcgcgagcgtcgacggctcgcgcgtcgcgaccggctccgacttcgccgac
gacggcaccctgaagcagaaggcgtccgctgcgacggtgctcaccgaggagtcggcgacc
gcgctggtctccgcgctcgagggcgcgcaggcacgggtcgcgagcctggagtccaagccc
tacacccgtcggcccgccgccccgttcaccacctcctccctccagcaggaggcctcgcgc
aagctgcgcctgggcgcccgtcagaccatgcgcgtcgcgcaggggctgtacgagaacggg
tacatcacctacatgcgtacggactccgtggcgctgtcgggcgaggcgatcagcgcctcg
cgcgcccaggccgccgagctctacggctcgcagtacgtgcccgagaagccgcgccactac
cagaacaagtcccagaacgcgcaggaggcgcacgaggcgatccgccccgccggggaccgc
ttccgcacgcccgcgcaggtcgccggccagctctcgggcgacgacttccgtctctacgag
ctgatctggaagcgcacggtcgcctcccagatggccgacgccaagggcaccacgagctcc
gtcgagctggccgtcgagaaggccggccgcgccgccaccttccgcgcctcgggcactgtc
atcaccttccgcggtttcatggccgcctacgaggagggccgcgacgcctcgcgctacggc
gagcaggacgagaacgacaagcgcctgccgcagatggacgagggagacatgctggacgtc
gaggcgctcgtgcccgacggccacaccaccacccctcccccgcgcttcacggaggcctcg
ctggtgcgggcgctcgaggagcgcggcatcggccgcccctcgacctacgcctcgaccgtg
accacgatccaggaccgcggctacgtgctgcgccgcggctcggcgctcgtgcccagctgg
acggcgttcgccgtggtcaagctgctcgaggagcacttcgggccgttcatcgactacgac
ttcaccgcccagatggaggagcagctcgacaagatggcccgcggcgagctgggccgcagc
gagtacctcgacgacttctatcgggccgacgggaccgacggccccatcggactgcagccc
atggtcgagcaccagggcgacatcgacccccgcgagatcaactcgatcccgatcggcgag
gacatcacgctgcgcgtgggccgctacggcgcctacgtggagcgccccgcgcccgtcgac
ccggacgccgcgcccgcggctcccgacgccgagccggccccgccgcagcgcgcgagcctg
cccgacgatctcgcgcccgacgagctgaccgtcgagaaggcccgcgagctgctcgagcgc
cagaaggacgacggccgcgtgctgggcgaggacccggagaccggccatgacgtgatcgtc
aaggacggccgctacggcccctacgtcaccgaggtgctgccggaggacccggacgacaag
acccccaagtccaagcgccccaagccccgcaccgcgtcgctgctgaagtccatggacctg
gccaccgtcgacctcgacgacgccctcaagctgctctcgctgccgcgcgtggtgggggcc
gacgaggacggcaccgatatcaccgcgcagaacggccgctacggcccgtacctcaagaag
ggcacggactcgcgctcgctggagaccgaggagcagatcttctcgatcaccctggacgag
gcgaagaagatctactcccagcccaagcagcgcggccgcgcggccgcgaagccgccgctc
aaggaactgggcacggatccgacgagcgagaagccgatcgtggtgaaggacggccgcttc
ggcgcctacatcaccgacgggacgacgaacgtgaccctgcgccgcgacgactccctggac
gccctcacccacgaggtcgccgtcgagcgcctcgccgagaagcgcgcgaaggggccggcc
aagaagggcggtcgcagcaccacccgcaagaccacgaccaagagcgcgtcgaagagcacg
gccaagagcacgacgaagaaggccgcgccgaagtccggcagctcgagcaccacgaagagc
tga
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