Brachybacterium halotolerans subsp. kimchii: Bra3105_14550
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Entry
Bra3105_14550 CDS
T08518
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bhh
Brachybacterium halotolerans subsp. kimchii
Pathway
bhh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bra3105_14550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhh03400
]
Bra3105_14550
DNA repair and recombination proteins [BR:
bhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bra3105_14550
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bra3105_14550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_25
AAA_16
Anti-TRAP
ATPase
RNase_E_G_Thio
MobB
DUF5351
Motif
Other DBs
NCBI-ProteinID:
UEJ82053
LinkDB
All DBs
Position
complement(3247276..3249858)
Genome browser
AA seq
860 aa
AA seq
DB search
MSPHRIPRPSNIEVRGARVHNLRDVDVDVPLDSLVAIAGVSGSGKSSLALGVLYAEGSRR
YVEALSTYTRRRMSQAPRAAVDSVTHVPAALALRQRPAVPGVRSTFGTSTELLNVLRLMF
SRLASHLCPNGHRVPPTIDVAAEIPFSCPVCGAEVHAPGAESLAFNSEGACPRCEGIGTV
REVDDAALVPDPSKSLDEGAVAPWQMFGFNVQPDIAREFGVRTDVPFRDLTEAEREIVLD
GPEEKKHITVTSKKGVHDLDFTFRNARLTVTEELRRADSEKRLARVSRFLVETVCPDCRG
TRLSPAARAPRIGDLGLAEATALTLDDLLAWVPTVPGTLPSDMQPMARELVTQLTGMADR
LVQLGLGYLSLDRAGSSLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNIDGLLA
LIGDLLADGNSVLLVDHDVQVLREADHLIEIGPGSGREGGRIAASGSIAQVIGSGDSRLG
PFLDGSADVVVRDQASPAEVFARGVIGMTTSALHTVHPLTVRVPLGRLTAVTGVSGSGKT
TMVLESLVPALRAATARGSDGEPADGEPAASSDGSSRPVLPAHVRTLDAAGIRRVHQIDA
TPIGVNIRSTVATYSGVLDDLRRAFARTPEAKEAGLGAGDFSYNTGSLRCPRCEGTGRVV
LDVQFLPDVDIDCPECEGTRYSPAAQALPRRGVTLPRLMALTIQEAIEEVGDIPAVRRRL
QALVDLGLGYLTLGEDTPALSGGEAQRLKLSAHIDRGQTDALFVFDEPSVGLHPLDVRTL
LRVLDRLVGSGATVMVIEHDLDMIANADHVIDMGPGGGASGGRIVATGTPHELAEDPDSA
TGRFLRAHLAHPTEGSDAER
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccacaccggatcccccgccccagcaacatcgaggtgcgcggcgcgcgcgtgcac
aacctccgggacgtcgacgtcgacgtgccgctggactcactggtcgcgatcgccggggtc
tcgggctccggcaagtcctccctcgccctcggcgtgctctacgcggaggggtcgcgccgg
tacgtcgaagcgctctcgacctacacccgtcggcgcatgtcccaggccccgcgcgccgcg
gtcgactccgtgacccacgtgcccgcggcgctcgccctgcgccagcggccggcggtgccc
ggtgtgcgctcgaccttcgggacctccaccgagctgctgaacgtgctgcggctgatgttc
tcgcgcctggcctcgcacctgtgcccgaacggccaccgggtcccgccgacgatcgacgtc
gccgccgagatcccgttctcctgccccgtctgcggcgccgaggtgcacgccccgggcgcg
gagtcgctcgccttcaactccgagggcgcgtgcccgcgctgcgagggcatcggcacggtc
cgcgaggtcgacgacgccgccctcgtcccggatccctcgaagtccctcgacgagggagcc
gtcgccccctggcagatgttcggcttcaacgtccagcccgacatcgcccgcgagttcggg
gtgcgcacggacgtgcccttccgggatctcaccgaggccgagcgcgagatcgtgctggac
ggccccgaggagaagaagcacatcacggtgacgtcgaagaagggcgtgcacgacctcgac
ttcacgttccgcaacgctcggctcaccgtcaccgaggagctgcgccgcgccgacagcgag
aagcgcctggctcgcgtgagccgcttcctcgtggagaccgtgtgccccgattgccggggc
acccgcctgtcccccgccgcgcgcgctccccgcatcggcgacctcggcctcgccgaggcc
accgctctcaccctcgacgacctcctcgcctgggtccccaccgttcccgggacgctgccc
tccgacatgcagccgatggctcgcgagctggtcacccagctcacaggcatggccgaccgg
ctcgtgcagctggggctcggatacctgtcgctggaccgcgcgggctcctcgctctcgacc
ggcgagcgccagcgggtccagctcgcccgggcggtgcgcaaccgcaccacgggcgtgctc
tacgtgctcgacgagcccagcatcggcctgcacccctcgaacatcgacggactgctcgca
ctgatcggcgatctgctggccgacggcaactccgtgctcctcgtcgaccacgacgtgcag
gtgctgcgcgaggccgaccatctcatcgagatcggtccgggctccgggcgcgagggcggc
cggatcgccgcgagcggcagcatcgcgcaggtgatcggctccggggactcccgcctcggt
ccgttcctcgacggcagcgccgacgtggtggtccgcgaccaggcgtcccccgcggaggtg
ttcgcccggggagtcatcgggatgaccacgagcgccctgcacacggtgcacccgctgacg
gtgcgcgtcccgctcggccgcctcaccgcggtcaccggcgtctcgggctcgggcaagacc
acgatggtgctcgagtccctggtcccggcgctgcgcgcagcgacggcgcgcgggtccgac
ggagaaccggccgacggcgagccggcagcatcgtccgacggctcgtcccgtcccgtcctc
cccgcccacgtgcgcacgctcgatgccgccggcatccgccgcgtccaccagatcgatgcg
accccgatcggcgtgaacatccgctcgaccgtcgccacctacagcggcgtgctggacgac
ctgcgccgcgccttcgcccgcacccccgaggcgaaggaggccggactgggcgcgggcgac
ttctcgtacaacacggggtccctgcgctgtccccgctgcgagggcaccggccgcgtggtc
ctggacgtgcagttcctgcccgacgtcgacatcgactgccccgagtgcgaggggacccgc
tactcccccgccgcgcaggcgctcccgcgccgcggggtcacgctgccccgcctcatggcc
ctcaccatccaggaggcgatcgaggaggtgggagacatccccgcggtgcgcaggcgcctg
caggcgctcgtcgacctcggcctggggtacctgacgctcggcgaggacaccccggcgctc
tccggcggcgaggcccagcgcctcaagctctccgcgcacatcgaccgcggccagaccgac
gcgctcttcgtgttcgacgagcccagcgtcggcctgcatcccctggacgtgcgcaccctg
ctgcgcgtcctggaccgcctggtgggcagcggcgcgaccgtgatggtgatcgagcacgac
ctcgacatgatcgccaacgccgaccacgtgatcgacatggggcccggcggcggggcctcc
ggcggccgcatcgtcgcgaccgggaccccgcacgagctcgcggaggatccggacagcgcg
accggtcgcttcctgcgcgcgcacctcgcgcacccgacggagggatccgacgcagaacgc
tga
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