Brachybacterium halotolerans subsp. kimchii: Bra3105_16050
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Entry
Bra3105_16050 CDS
T08518
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bhh
Brachybacterium halotolerans subsp. kimchii
Pathway
bhh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bra3105_16050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhh03021
]
Bra3105_16050
03400 DNA repair and recombination proteins [BR:
bhh03400
]
Bra3105_16050
Enzymes [BR:
bhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bra3105_16050
Transcription machinery [BR:
bhh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bra3105_16050
DNA repair and recombination proteins [BR:
bhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bra3105_16050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UEJ82330
LinkDB
All DBs
Position
3580458..3581453
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AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEEVVSEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDITEVILNIKGLVVSSENDEPVVMYLRKEGEGDVTAADITPPAGVEIHN
PDLHIATLSSKGRLEIELVVERGRGYVSAAQNKGVDAEIGRVPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLIVDVETKPAISPRDAVASAGKTLVELFGLAHELNNEAEGIDIGPSPTD
QALAQDLALPISDLNLTVRSYNCLMREGVHTVGELTSRSEADLLDIRNFGQKSIDEVKAK
LADLGLSLKDSPAGFDPSAIATYDDDYGDQY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccacgctgaccgaagaggtcgtgtcggagtaccgctcccgg
ttcgtcatcgagccgctcgagcccgggttcggctacacgctcggcaattcgctgcgccgc
accctcctgtcctcgatccccggtgccgcggtcacctcgatccgcatcgacggcgtgctg
cacgagttcagcaccgtccccggggtcaaggaggacatcaccgaggtcatcctgaacatc
aagggcctggtcgtctcctcggagaacgacgagcccgtcgtgatgtacctgcgcaaggag
ggtgagggcgacgtgaccgccgccgacatcaccccgccggccggcgtcgagatccacaac
ccggatctgcacatcgcgaccctctcgtcgaagggccgcctggagatcgagctggtcgtc
gagcgcggccgcggctacgtctccgccgcgcagaacaagggcgtggacgccgagatcggc
cgcgtgccggtcgactcgatctactcgcccgtgctcaaggtgacctacaaggtcgaggct
acccgcgtcgagcagcgcaccgacttcgaccgtctgatcgtggacgtcgagaccaagccg
gccatctccccgcgcgacgccgtggcgtcggccgggaagaccctggtcgagctgttcggc
ctggcccacgagctgaacaacgaggccgagggcatcgacatcggcccctcgccgacggac
caggcgctcgcgcaggacctcgccctgccgatcagcgacctgaacctcacggtccgctcg
tacaactgcctcatgcgcgagggcgtgcacaccgtcggtgagctcacctcccgctccgag
gccgatctgctggacatccgcaacttcgggcagaagtccatcgacgaggtcaaggcgaag
ctcgccgacctcggtctgtcgctcaaggactcgccggccggcttcgatccgtcggccatc
gcgacctacgacgacgactacggcgaccagtactga
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