Brachybacterium halotolerans subsp. kimchii: Bra3105_16710
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Entry
Bra3105_16710 CDS
T08518
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
bhh
Brachybacterium halotolerans subsp. kimchii
Pathway
bhh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bra3105_16710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhh03400
]
Bra3105_16710
Enzymes [BR:
bhh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
Bra3105_16710
DNA repair and recombination proteins [BR:
bhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bra3105_16710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF6417
Motif
Other DBs
NCBI-ProteinID:
UEJ82454
LinkDB
All DBs
Position
complement(3729930..3730559)
Genome browser
AA seq
209 aa
AA seq
DB search
MTSRRPSPLGGRRPTKDDLAQVSTTDPHGVDDILPGPGDPLPPRMLIVGINPGLWTAAVN
APFARPGNRFWPSLHRAGLTDHQVDCAAGLTEEDEQQLLGRGIGLTNLVGRATVRADQLA
REELHEGGRRLVERVREMRPRSVAIAGITAYRTAFRLPRAKLGLQDPADVEDWPEDSLLW
VVPQPSGLNAHANIDTLARDWREVWDSTR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgccgcccctcgccactcggaggccgacgtcccaccaaggacgatctcgcg
caggtctccaccacggaccctcacggcgtcgacgacatcctgcccggcccgggcgacccg
ttgccgccgcgcatgctcatcgtcggcatcaaccccgggctctggaccgccgcggtcaac
gccccgttcgcgcgccccgggaacaggttctggccgtccctgcaccgcgctggcctcacc
gaccaccaggtcgactgcgccgcgggactcaccgaggaggacgagcagcagctgctcggc
cgaggcatcggcctgacgaacctcgtcggccgcgccacggtccgcgccgaccagctcgcg
cgcgaggagctgcacgagggcgggcgacggctcgtcgaacgggtgcgcgagatgcgaccg
cgctccgtcgcgatcgcgggcatcaccgcctaccgcaccgccttccgcctgccccgggcg
aagctgggactgcaggatccggccgacgtcgaggactggcccgaggactcgctgctgtgg
gtggtgccgcagccgagcgggctcaacgcccacgccaacatcgacaccctcgcccgtgac
tggcgcgaggtgtgggacagcacccgctga
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