Brachybacterium halotolerans subsp. kimchii: Bra3105_16965
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Entry
Bra3105_16965 CDS
T08518
Name
(GenBank) Ig-like domain-containing protein
Organism
bhh
Brachybacterium halotolerans subsp. kimchii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
fn3
Cadherin_4
Cadherin_5
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn3_2
Motif
Other DBs
NCBI-ProteinID:
UEJ82499
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All DBs
Position
3788841..3795089
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AA seq
2082 aa
AA seq
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MAFAMTGRRRRRTLISSAVLAVLALVVTICAVRFDGLASAEVTVNNGAVWVTNSQKHLLG
RLNVDAREFDGREAIDGDDLDVLQDGYHVMVTGPKGIIPIDTATVERTGNIDLGLDPEVD
LGSDRVGIIGTGGRVWVADAAQISSFSATGQKPLLTAEDESAQIAVTDSGTVFVLDGKQL
YKIPRTLDVGAEKPEKIGTIDDLSSSEDAVSLTTVGETPVVLDTETGHGRLHIGEDAKTT
VALEDLGASTASVQGAELQQPGPESDDVVLATTDTLYQIPLSGSAGKAQHHPSGGNGEPV
APAQVAGCAYGAWNGSLRYVRVCGGEVKADTIEDARDESDLALRVNGDLVVLNDQESGLS
WMISQDMTLVDDWVVTQDIKKDDRKQEEKETKTSTVANLDYDRKEDNRDPVANPDEMGVR
PGSSTVLDVLRNDTDPDGDVLTAKPKKAESDLGRVTPIRGGTQLQIDVPEDAKPGTKKEI
VYTVSDGRGGTAESVATLTVRGEQDDAPPELAQDETPKMKIRSGRSFSFNILPYYRDPDG
DDFYLAGASVEPQDSVTFTPDGVVSYTDAGLEDGEKSISLTLRDDKGQEFESELKVEVVQ
DEDLAPITTADHTQVVAGSTVDLEPLENDLSPSGDKLELAEVSLEGGGDGLDIEKDLDAG
TVSVTGRTAGTYYLDYTIVGGTQSADGLIRVDVADPSAEAEKPVAVDDLGMVTAGGSTLV
DPLENDVDPTGGVLVVDSVSVPDGSGVDARVLDHHLIKISADPDAETDGEPVPISYTVAN
QAGEVEGTVQTMVVKTDSQFAEPKTVNDEVTVRAGDLVTADVLANDTSPIDSDLALGGDF
RDADDAEDMGTLETYQDKIRFTAKPDAKGETSLSYTATDETGRSASARLRITVVPDDASN
ERPAPQNLTARTVAGSTVRIPVSLSGVDPDGDSVILTGVTGDAPSKGRVTSASGEWIDYV
ADDDASGTDTFRYQVMDRQGAVGTAEVKIGIAARTETNQYPIAEDDTVEAKPGRKLQVFP
LENDTDPEGAPLSIDRDLVKSEDGSVDLDQDQAKGSASVDMVTPEEPGTYTIRYGASDGS
LSDEASILLTVKEDAEERAPIVTDDFVPAAEVLDESSDHVDVDALANDVDPDGSVKDLEL
AIDGSPEGVQIVDEDRGIVRVTPREEPFRIRYTATDLDDHSAAGYIWVPGTSKQAPTWVG
EPITVQAGTEAKIPLDDTDNVRVRPGGQAPVITDTATVKAKHANGDSLVADEHTLVYRAA
DDYSGEDTITAEVTDGPRGDDTAAVGMLSIPVTVESKDNKPPSIQGTDLEVEQGGDARQV
DLARTADDPEGDDLTFESTGETGVDGISVEVSPEGVVSAQADADVAKGTKFSVPVSVSDG
TNDPVKAEISGTVTGSREPLPSAQEDTYDIDAGDTKTVRPTANDTEPLGKPVTIVDAKAK
AGTIDVDHTDDAVTLAPGADFHGVATVSYTIQDATKDPDRQDTGTIRVNVRGKPDSPSAP
RIEETGDGYVVLGFEPGNDNGAPITGYTVKPAGGGKSTQCESTTCKISGLTNDTEYTFTV
AATNDVGTSEPSAASAKARPDVKPEKPDAPRVKRGDGKLQVSWTKPVNHGSPIIEYVLQM
IGADGSTRSIPVEGGSTSTTVDGLTNGVDYTFSVRAKNKADEPSDWSERSSAEHPAGKPK
KPSGKITATRFEDELGGTVLVKWPAMTEDEQNGEKVTSYTVTAHPGKGGGAEKTITTKDG
KTSGRFDDLDRNTEYTFTYTGTNSVGKGTGASAASNPVTAYAKAKAPTGVTASLPDAHTG
SGPNGRVTVSWKKADGRGTPIDHYMVRWPGGEPRTVDASKDSVTIDGLENGKDYTFTVQA
YNRFAGGESELSKASSAVRPYTKPDAPSVTMSAANCSGTSCPVTAKIRANGGGGVGVSTV
QYRVNGGGWKDLGAGGGDPQVGAKGGTKYTVDARVVNSEKLVSGTTSDSATAKSPTPKQS
GEADWEGEGGASGETGCENGSCRWFSFSLENMEPGKTYQLDFYEYETDSKWSEGASSLPK
EITADGQGRFTSTHQYFHGYPGKKFDVLLDGKKVATITEPKK
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
gtggcattcgcgatgacgggccgacgacgccggcgcaccctcatctccagcgccgtcctg
gccgttctcgcgctcgtcgtcaccatctgcgccgtgcgcttcgacggactcgcctccgcc
gaggtcaccgtcaacaacggtgccgtgtgggtgaccaactcccagaagcacctcctgggg
cgcctcaacgtcgatgcccgggagttcgacggccgcgaagccatcgacggcgacgacctc
gacgtcctgcaggacggataccacgtgatggtcaccggtcccaagggcatcatccccatc
gacaccgccaccgtggagcgcaccggcaacatcgacctcggcctcgaccccgaggtggat
ctcggatccgaccgcgtcggcatcatcggcaccgggggacgcgtctgggtcgccgacgca
gcccagatctcctccttctccgcgacggggcagaagccgctgctcaccgcggaggacgag
agcgcgcagatcgccgtcaccgactccgggaccgtcttcgtgctcgacgggaagcagctg
tacaagatcccgcgcaccctcgacgtgggtgcggagaagcccgagaagatcgggaccatc
gacgacctctcgagcagcgaggacgcggtctccctcaccaccgtcggcgagacgcccgtc
gtgctcgacaccgagaccggccacggccgactgcacatcggcgaggacgcgaagacgacg
gtcgcgctcgaggacctcggggcatccaccgcgagcgtccagggcgccgagctccagcag
ccgggccccgagtccgacgacgtcgtcctcgccaccacggatacgctctaccagatcccg
ctcagcggctcggccgggaaggcgcagcaccacccgtccggcgggaacggggagcccgtg
gcgcccgcgcaggtcgccggctgcgcctacggggcgtggaacgggtccctgcgctacgtg
cgcgtctgcggcggggaggtgaaggccgacacgatcgaggacgcccgcgacgagagcgac
ctcgccctgcgcgtcaacggggacctcgtcgtcctcaacgaccaggagagcgggctgtcc
tggatgatctcccaggacatgacgctggtcgacgactgggtggtcacccaggacatcaag
aaggacgaccgcaagcaggaggagaaggagaccaagacctccacggtcgcgaacctcgac
tacgaccgcaaggaggacaaccgcgacccggtggcgaaccccgacgagatgggcgtgcga
cccggatccagcaccgtgctggacgtgctgcgcaacgacaccgaccctgacggcgacgtc
ctcaccgcgaagcccaagaaggccgagagcgacctggggcgcgtgaccccgatccggggc
ggcacccaactgcagatcgacgtccccgaggacgcgaagcccgggacgaagaaggagatc
gtctacacggtctccgacggccggggcggcaccgcggagtccgtcgcgaccctcacggtc
cggggagagcaggacgacgccccgcccgagctcgcccaggacgagacgccgaagatgaag
atccggtccgggcgcagcttcagcttcaacatcctgccctactaccgtgatcccgacggc
gacgacttctacctcgccggagccagcgtcgagccgcaggacagcgtcaccttcaccccg
gacggcgttgtcagctacaccgacgcgggcctcgaggacggggagaagtccatctccctc
accctgcgcgacgacaagggccaggagttcgagagcgaactcaaggtggaagtcgtccag
gacgaggacctcgcaccgatcaccacggccgaccacacccaggtcgtcgccggcagcacc
gtcgacctcgaaccgctcgagaacgacctgagcccctcgggcgacaagctcgagctcgca
gaggtctccctcgagggcggcggggacggtctcgacatcgagaaggacctcgacgccggc
accgtctccgtcaccggcaggacggccggcacctactacctcgactacacgatcgtcggc
ggcacgcagagcgccgacgggctcatccgcgtggacgtcgccgacccgagcgccgaggcc
gagaagcccgtcgccgtggacgacctcggcatggtcaccgccggcgggtccaccctcgtc
gacccgctcgagaacgacgtcgacccgaccgggggagtgctggtcgtcgactccgtgtcg
gtgcccgacggcagcggcgtcgatgcgcgcgtgctcgaccaccacctgatcaagatctcc
gcggatcccgatgctgagaccgacggcgagcccgtcccgatctcctacaccgtcgccaac
caggccggcgaggtcgagggcaccgtccagaccatggtcgtgaagaccgacagccagttc
gccgagccgaagaccgtcaacgacgaggtgaccgtgcgggcgggagacctggtgacggcc
gacgtcctcgccaacgacacctccccgatcgactccgacctcgcgctcggcggcgacttc
cgcgacgccgacgacgcggaggacatggggacgctcgagacctatcaggacaagatccgc
ttcaccgcgaagcccgatgccaagggcgagacctccctgtcctacaccgccaccgacgag
accgggcgctcggcctccgcgcgcctgcggatcaccgtggtcccggacgacgccagcaac
gagcgccccgcgccgcagaacctcaccgcgcgcaccgtcgccgggagcacggtgcgcatc
cccgtgagcctcagcggcgtcgatcccgacggcgactccgtgatcctcacgggagtcacc
ggcgacgccccgagcaagggacgcgtgacctccgcgtccggggagtggatcgactacgtg
gccgatgacgacgcctcgggcacggacaccttccgctaccaggtcatggaccgccagggc
gccgtcggcacggccgaggtgaagatcggcatcgccgcccgcaccgagaccaatcagtac
cccatcgccgaggacgacacggtcgaggccaagccgggccgcaagctgcaggtcttcccg
ctggagaacgacaccgaccccgagggggcgccgctcagcatcgaccgggacctcgtgaag
tccgaggacggatccgtcgacctcgaccaggaccaggcgaaggggtcggcctccgtcgac
atggtgacgccggaggagcccggcacgtacaccatcaggtacggcgcgagcgacggatcc
ctctccgacgaggccagcatcctgctgaccgtcaaggaggacgccgaggagcgcgctccg
atcgtcaccgacgacttcgtccccgccgcggaggtgctcgacgagagcagcgaccacgtg
gacgtcgacgccctcgcgaacgacgtcgaccccgacggcagcgtgaaggacctcgagctc
gcgatcgacggcagccccgagggcgtgcagatcgtcgacgaggaccgcgggatcgtgcgc
gtcaccccgcgggaggagcccttccggatccgctacaccgccaccgacctcgacgaccat
tccgcggccggctacatctgggtgccgggcacctcgaagcaggcccccacctgggtcggc
gagcccatcaccgtccaggccgggacggaggcgaagatcccgctcgacgacacggacaac
gtgcgcgtgcgaccgggcggccaggcacccgtcatcaccgataccgccaccgtgaaggcg
aagcacgcgaacggcgacagcctcgtcgcggacgagcacacccttgtgtaccgcgcggcc
gacgactactccggcgaggacacgatcaccgccgaggtcaccgacgggccgcgcggcgac
gacaccgcggccgtgggcatgctgtcgatcccggtcacggtcgagtccaaggacaacaag
ccgccgtcgatccaggggaccgacctcgaggtcgagcagggcggcgacgcccgccaggtc
gacctcgcccggaccgcagacgaccccgagggcgacgacctcacgttcgagtccaccggc
gagaccggagtggacggcatcagcgtcgaggtcagccccgagggagtggtgagcgcccag
gccgatgccgacgtcgccaagggcacgaagttctcggtgcccgtctccgtctccgacggc
accaacgaccccgtgaaggccgagatcagcggcacggtcaccggctcccgggagccgctc
ccgtccgcccaggaggacacctacgacatcgacgcgggggacacgaagaccgtgcgcccc
accgcgaacgacaccgagcccctgggcaagcccgtcaccatcgtcgacgcgaaggcgaag
gccggcacgatcgacgtggaccacacggacgacgcggtgacgctggcgcccggcgccgac
ttccacggcgtcgccaccgtcagctacaccatccaggacgccaccaaggatcccgaccgg
caggacacgggcaccatccgcgtcaacgtgcgcggcaagccggattccccctcggcgcct
cgcatcgaggagaccggcgacgggtacgtggtgctcggattcgagccggggaacgacaac
ggcgccccgatcacggggtacacggtgaagcccgccggcggtgggaagtccacgcagtgc
gagagcacgacctgcaagatcagcggactcaccaacgacaccgagtacaccttcaccgtc
gccgcgacgaacgacgtggggacgtcggagccgtcggccgcctcggcgaaggcccgtccc
gacgtgaagccggagaagcccgacgctccgcgcgtgaagcgcggcgacgggaagctccag
gtgtcctggacgaagcccgtcaaccacggctcgcccatcatcgagtacgtgctgcagatg
atcggcgcggacggttccacgaggtcgatcccggtcgagggcgggagcaccagcaccacc
gtggacgggctgaccaacggcgtcgactacaccttcagcgtccgcgcgaagaacaaggcc
gacgagccctccgactggtccgagcggtcgtcggcggagcacccggcaggcaagcccaag
aaaccgtcagggaagatcaccgcgacgcgcttcgaagacgaactgggcggcactgtcctg
gtgaagtggccggcgatgaccgaggacgagcagaacggcgagaaggtcacctcgtacacc
gtcaccgcccatcccgggaagggcggcggtgccgagaagaccatcaccacgaaggacggg
aagacctccggtcgcttcgacgacctggaccgcaacacggagtacacgttcacctacacg
ggcacgaattccgtgggcaaggggacaggggcctcggcggcctcgaacccggtcacggcg
tacgcgaaggcgaaggcccccacgggcgtgacggcctccctccccgacgcccacacgggc
agcgggcccaacggccgcgtcacggtctcctggaagaaggcggacgggcgcggcacgccg
atcgaccactacatggtgcgctggcccggcggcgagccgcggaccgtggacgcctcgaag
gactccgtgacgatcgacgggctggagaacgggaaggactatacgttcaccgtgcaggcg
tacaaccgcttcgcgggcggcgagagcgagctctcgaaggcctcgagcgccgtgcgcccg
tacacgaagccggatgcgccgtcggtgacgatgagcgcagcgaactgcagcggcacctcc
tgccccgtgaccgcgaagatcagggccaacggcggcggcggggtcggcgtgagcacagtc
cagtaccgcgtgaacggcggcggctggaaggacctcggcgccggcggcggcgatccgcag
gtcggagcgaagggcggcacgaagtacaccgtcgatgcgcgcgtcgtgaacagcgagaag
ctcgtcagcggcaccacctccgactccgcgaccgcgaagtcccccaccccgaaacagtcg
ggggaagccgactgggagggcgagggcggagcctcaggagagaccggctgcgagaacggc
agctgccgctggttcagcttcagcctcgagaacatggagccggggaagacgtaccagctc
gacttctacgagtacgagactgatagcaagtggtccgagggggcgagctcccttccgaag
gagatcactgctgacggtcaggggcggttcaccagcacccatcagtacttccacggctac
ccgggcaagaagttcgacgtcctgctcgacgggaagaaggtcgcgacgatcacggagccc
aagaagtga
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