Benincasa hispida (wax gourd): 120073715
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Entry
120073715 CDS
T07258
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120073715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120073715
03041 Spliceosome [BR:
bhj03041
]
120073715
03032 DNA replication proteins [BR:
bhj03032
]
120073715
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
120073715
Spliceosome [BR:
bhj03041
]
Complex A
U1 snRNP components
Sm proteins
120073715
U2 snRNP components
120073715
Complex B
U1 snRNP components
120073715
U4/U6.U5 tri-snRNP components
120073715
Complex C
U2 snRNP components
120073715
DNA replication proteins [BR:
bhj03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
120073715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
120073715
NCBI-ProteinID:
XP_038882444
LinkDB
All DBs
Position
3:4562764..4568540
Genome browser
AA seq
284 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ
APPPVGRGMPPPVPPPQFSAARPGGAPPQPFPVPPQFAQRPMGPPPTGQVMRGPPPPPRP
GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtctaagagttcgaagatgctccagtatattaattatcggatgagggtcacc
attcaagatggtcgccaattggtcggcaagttcatggccttcgatcggcacatgaacctc
gtcctcggcgactgcgaggagttccgcaagctgcctccggctaagggtaaaaagaccaac
gaagaacgcgacgagcgtcgtacccttgggcttgttcttctccgtggcgaagaggtcatt
tccatgacagtggagggtccaccgcctgctgaagagtcccgtgctaaggctgtcaatgct
gcggctatggctgggcctggtattggccgtgccgctggtaggggtatcccgactgctcct
ctggttcaggcgcagcctggtcttgctgggccagttcgtggagtgggtggacccgctccg
gggatgatgcagcctcaaatctctcgcccgccagtacctcagctgtccgctccgccgatg
acatatccggctgcccccgttatccgtccacctggtcagatgccgatgtttcctgggcaa
gctccacctcccgtcgggagaggtatgcctcctccggtgcctccaccccaattctctgca
gcgagaccagggggtgccccaccacaacctttcccggttcctcctcaatttgcgcagaga
cccatgggacctccaccaaccgggcaggtgatgaggggaccgccaccaccacccaggcct
ggaatgccagctcccccgcctcgacctgggatgcctcctccgcccggtggcgctgttcct
gtttacggaccaccccgtcctggcatgccgcctccgcccaatcctcagaatcagcagcaa
aatcaacagcaatag
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