Benincasa hispida (wax gourd): 120075360
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Entry
120075360 CDS
T07258
Name
(RefSeq) tRNA pseudouridine(38/39) synthase isoform X1
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120075360
Enzymes [BR:
bhj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
120075360
Transfer RNA biogenesis [BR:
bhj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120075360
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GFIT
Motif
Pfam:
PseudoU_synth_1
RIMB1_N
HAP1_N
Rab11-FIP3
DUF2205
SlyX
GIT_CC
Motif
Other DBs
NCBI-GeneID:
120075360
NCBI-ProteinID:
XP_038884603
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All DBs
Position
4:40149259..40159693
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AA seq
460 aa
AA seq
DB search
MDGAEHSLDYRESTEAIGMTSGANEFQPFNGNQIASLQSQLRLLQGRVKELEEENSKLSS
RFASCRCSERRMNFDDGSSSIGKSKESSTTKKKAVKKTAGYNTRILDHCSKRYIALKVMY
FGQRFYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIAL
YLRSNLKDPPNGENSYHNGEEQHDGEIDYVRVINRALPNDIRVLGWCTVPVGFSARFSCL
RRKYKYFFWGANLNISAMERAGKKFVGEHDFRNFCKMDAANVHNYRRRIMSFDISPCDVR
MEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLNPLRTPRKPQYVMAS
ENPLVLHSCEFEHVKFRCSSDAGEALQLHLWNEIRTYELQAAIFKEALLSCLPITNGLNY
GSSSDIRKLKKKNCHVALLSRPTEPSYEERRAKLDSTSTS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcggaacattcccttgactacagagaatctaccgaagcaatcgggatgact
tcaggagctaacgagtttcaacccttcaatggaaaccaaattgccagtcttcaatcccag
cttcgtcttctccaaggcagggttaaggaattggaggaggaaaattcgaagctatcctct
cgatttgcaagttgccgctgttctgagaggaggatgaactttgacgacgggagtagttcg
attgggaaaagcaaggaatctagcactactaagaagaaagcagtaaaaaaaacggcaggt
tataacacaaggatcttggatcactgttcaaagagatatattgctctaaaagtaatgtat
ttcgggcagaggttctacggttttgcttcagaggcgcaaatggagccaacagttgaatct
gaaatcttcagagcgcttgagaaagccaggcttcttgttggtggtaggaaggagtcttgt
tattcaagatgtgggagaacggacaagggggtctcatccgttggacaagtaattgctctc
tatttgcggtcaaaccttaaggatccccctaatggtgaaaatagttatcataatggggaa
gagcaacatgatggagaaattgattatgtaagagtaattaatagagcccttcctaatgac
atacgggttttaggctggtgtactgttcctgttggcttcagtgcaaggtttagttgtttg
agaagaaagtataaatactttttctggggagcaaatttgaatatctcggctatggagagg
gcgggtaagaagtttgtaggggaacatgacttcagaaacttctgcaaaatggacgcagca
aatgttcacaattataggcgacgcatcatgtcatttgacatttctccttgtgatgtgagg
atggaaggcaatctattatgggcattcaacattgaaggtagtgctttcctctggcatcag
gtccgctgcatggtcgctgttgtattcatggttgggcaaggtcttgaagatcctgatgtc
gtagatattctattgaatccactaagaacgccaaggaagcctcaatacgttatggcctca
gaaaatcctctggttcttcattcttgtgaatttgaacatgtcaaatttaggtgttcatca
gatgctggagaagctcttcagttgcatttatggaatgaaatccgaacatatgagctccaa
gctgcaatattcaaagaagctcttctaagctgtttgccaatcacaaatggtttgaattat
gggagctcttcagacatcagaaagttaaagaagaaaaattgccatgttgccctattgtca
aggccaactgagccttcttatgaagagcggcgtgccaagcttgactcaacatcaacgagt
tga
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