Benincasa hispida (wax gourd): 120079649
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Entry
120079649 CDS
T07258
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04075
Plant hormone signal transduction
bhj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120079649
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120079649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhj03000
]
120079649
Transcription factors [BR:
bhj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120079649
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
120079649
NCBI-ProteinID:
XP_038889847
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Position
6:42141645..42147837
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AA seq
709 aa
AA seq
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MPLSELYRVARGKLDSTQDKNNMVASDLSMNPENDVFELVWENGQILLQGQSNRTRKNSN
LNTSQGQCLPSHSPRDRDRDAGYFNNAKMGKFGAIDSVVRDVMSTAPSPDVELAHDDDDM
VPWLSYPLDGHLQHDYSSDFLPELSGVTNDFPSRNSIASSIGKANGGNQVNRERDMNLNS
LHGANLEDGNMSKLSSLDVSTTKPRSSTNQLHSSASQQSQTSFPHLRTKCTGGTENTTGK
ILHDSLVGHSPQVQLIASSSSSTARQKLDPTPPSNSSHIINFSHFLRPAALLKSNPQNHG
VPGTRGSCNLDSMVKNCSAANNQPHESSLIATRGGIRNESSSCCKNAVVPSIDGKNTSDA
KAPEQSQANKQPEVACLGDSADHDDCLKHCLEVGATKGLPDSEKAVESAIAASLCSRNSV
EGASDDPLLNRKRKCHDTEDSEWHSDDVEEECNDVKRVTSARGTGSKRSRAAEVHNLSER
RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLFMPPVMFP
GGMPPMNAPHIYPPMGLGMGMGFGIGMPDMSGGSPGFPMVQMPHMQGMHFHGPSMPAQTV
MHGLPSSNFQVLGFPGQGLPMPMPRRPIAPFSGGPFMTNSSVAVAPVENFGSAAACNSKD
ASPNINSPMVPNGGTDPSITPALGQANEQASCVNGSGVNPTSKNDLIAN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcctctatctgagctttatcgtgtggccagagggaagctggattcaactcaagacaaa
aacaacatggttgcttctgatttatctatgaatcctgagaatgacgttttcgagctggtg
tgggagaatggccaaattttgttgcaaggccagtccaataggaccaggaagaactcaaat
ttaaacacttcacagggtcaatgtttaccatctcatagtcccagggatagagatagagat
gcaggatatttcaacaatgcaaagatggggaagtttggggctattgattctgtagtaaga
gatgttatgtcaacggccccttcgccggacgttgaattagctcatgatgatgatgatatg
gtaccttggctaagttatcctcttgatggacatctacaacacgattattcttctgatttc
ttacctgaattatctggtgtcactaatgactttccctcacgcaatagcattgcatcttct
ataggcaaagctaatggcggtaatcaggtgaacagagagagagatatgaacctaaattct
ttgcacggagctaatctagaagatggcaatatgtccaagctttcttccttagatgtttca
actacgaaacctagaagtagcacgaaccaattacattcatcagcatcccagcaaagccag
acatcatttccacatctcagaacaaaatgtactggaggcactgaaaatactacaggcaag
attctccatgattctcttgtgggccactctcctcaggttcaattgattgcaagcagttct
tcaagcacagcaaggcaaaagctagatccaactcctccaagtaattcatcccatatcata
aatttctcccattttctgcgacctgctgctcttctcaaatccaatcctcagaaccatggt
gtccctggaactaggggttcgtgcaatttggacagcatggttaagaactgttcggctgct
aataatcaaccccatgaatcatcattaattgcaactcgaggtggtataagaaatgaatca
agttcatgttgtaaaaatgcggtagtgccttccatagatggtaaaaatacatcagatgcc
aaggctcctgagcaatcacaggctaacaaacagcctgaggttgcttgtttgggagattca
gccgaccacgatgactgccttaaacattgtcttgaagttggtgcaacgaaaggattgcca
gatagtgagaaggctgttgaatctgcaattgctgcttccctttgttcacggaatagtgtg
gagggggcttctgatgatccactgcttaataggaagagaaaatgtcatgacactgaggat
tctgaatggcatagtgatgatgtagaagaagaatgcaatgatgtgaagagagtgacttct
gctcgaggaactggttcaaaaagaagcagggcagcagaagtgcataatttatcagaaaga
cgacgtagagataggatcaatgagaagatgcgtgcactgcaagaactcataccaaattgt
aataaggtcgacaaagcttccatgcttgatgaagccattgagtacttgaaaacacttcaa
cttcaggttcagattatgtcgatgggagctggtttgttcatgcctcctgtgatgttccct
ggaggaatgccacccatgaatgcacctcacatttatccacccatgggtttaggaatggga
atgggatttgggataggtatgccagacatgagtggtggttctcctggttttcccatggtt
caaatgccacacatgcaaggaatgcatttccatggcccatctatgccagctcaaactgta
atgcatggactgccaagttctaactttcaggttcttggatttcctggtcaaggacttccc
atgcccatgccacgccgaccgattgcaccgttttctggaggaccttttatgactaattcc
agtgtggcagtagctcctgtggagaattttggttcagctgcagcctgcaactcgaaagat
gcatctccaaacattaattcacccatggtgccaaatggtggcaccgacccttcaattact
ccagctcttggacaggctaatgaacaagcttcctgtgttaatggcagcggtgtgaacccc
accagcaaaaacgaccttatagctaactaa
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