Benincasa hispida (wax gourd): 120082869
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Entry
120082869 CDS
T07258
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120082869
Spliceosome [BR:
bhj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
120082869
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GFIT
Motif
Pfam:
HEAT
INTS4_C
Cnd1
HEAT_2
HEAT_MROH2B_C
PDS5
HEAT_GCN1_C
HEAT_EZ
VPS15-like_hel
TPR_DNAAF5
Adaptin_N
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
120082869
NCBI-ProteinID:
XP_038894154
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All DBs
Position
8:10069451..10086017
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AA seq
815 aa
AA seq
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MEERDLELVSAINELDDQSFLSLCFGPSVSIRTWLLNNAERFQLRPSLLFTVFLGFTKDP
YPYVRKAALDGLLGLGNTVLEDGSMIEGCYCRSIELLNDMEDCVRSAAVSVVITWGLMLA
AHSPGRKQHLSDEIFVNLCSMTRDMNMKVRVNAFDAMKRLEIVSEDLLLQSVSKRVLSIF
KGKKSLVQCSTEQLEMSALDVAGAFVHGVEDEFYQVRRSACDALFNLTILSTKFAGEALS
LLMDLLNDDSVSVRLRALETLHHMAMCNCLKLQEAHMHMFLSALNDNDGHVRSALRKLLK
VAKLPDLVTFQLSFNGLLESLESYPQDESDVLSVLFHMGQNHVNMVDSIIKDVFEQIDPT
SEGKLGFDSAKVIAYIVLAISAPVSDNHTRRIPPRIFSYAATMLGRISHALGDIMDQTTV
FAYLLQNSKHIGLSDLGFNPEGDPCSPTPGNSVNDMPAIASLKIPAMIHEQRQKDDDAIE
SIKTILLKVQDIWPLIQSGGLHEALRTLRFCKETLGIFTYRTDRYSGALAFTLQYLKIMK
LIAEVWKLMSSKHSCPRRIGEWGFLLGKLERRLKELRSRFIGFSKEEERHILELMLVTCT
LRLSSGEVCCHLTILRKLSTIATNIEHLLKEECKEPSTFVCEVQRSLSNLGRITPKAHCS
SPDFRKLLKSFTLNHLEISENLEHVKAELVVLDNDYEKPLYFVPGLPVGIPCQIILHNVR
SKRKLWFRITMDNMTSQFIFLDFLSLGGCDEVREFTYIVPFYRTPKASSFIARICIGLEC
WFENTEVNERCGGPKRDLAYICKEKEVYFSMIHKG
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgggacctagaacttgtttctgccattaacgaactcgacgatcagtcattc
ctctcgctttgctttggtccttcagtgtccatcaggacttggcttctcaacaacgctgag
aggttccaattaaggccatcattgttattcactgttttcctagggtttacgaaagatccg
tatccatatgttaggaaagctgctcttgatggcctattaggtttggggaacactgttctt
gaggatggtagcatgattgaaggttgctattgccgctctattgaacttctaaacgacatg
gaggattgtgttaggtcagctgcagtttctgttgtcataacttggggtctaatgcttgcg
gcacatagtccagggaggaaacaacatttgtctgatgaaatatttgtgaatctatgttcc
atgacgagagatatgaacatgaaggtcagggttaatgcatttgatgcaatgaagaggctg
gaaattgtttccgaggatcttcttttacaaagtgtgtccaagagagtcttgagtatcttc
aagggtaaaaaatctcttgttcaatgctctaccgagcaattggaaatgtcagcgttggat
gttgctggggcttttgtgcatggtgtagaagatgaattctatcaggtgcgcaggtctgcc
tgcgatgctttatttaatttgaccatcctatcaactaaattcgctggcgaggccttaagc
ctattgatggacctcctgaatgatgattcagtttctgtccgcttgcgagctttggaaaca
ttacatcatatggcgatgtgcaattgtttgaaattgcaagaagcgcatatgcacatgttt
ctcagtgctttaaatgacaatgatggtcatgtaagatctgctttaaggaaacttcttaaa
gtagcaaagctaccagatttggtgacatttcaattgtcttttaatggtcttcttgaaagt
ttagaatcatacccgcaggatgagtctgatgtgctctctgtgctatttcatatgggtcag
aatcatgtaaatatggtcgactccattatcaaggatgtttttgaacagatagacccaaca
tctgaaggaaaacttggatttgatagtgcgaaggtgattgcatacattgttctagctatt
tcggctcccgtttcagacaatcatactcgtaggattccaccaagaatattttcttatgca
gctacaatgcttggaaggatctctcatgctttgggtgacattatggatcaaaccaccgtt
tttgcttacttgctgcaaaacagtaaacacattggattatctgatctggggtttaatcca
gagggagacccatgctcacctacacctggaaattctgtcaacgatatgcctgccattgcc
tcccttaagatacctgcaatgatacatgagcagcggcagaaagatgatgatgccatagaa
tctatcaagactatcctcttaaaggtgcaagatatttggccactaattcaatccggaggt
ttgcatgaagctttgaggactttgaggttctgcaaggaaacattgggaatattcacgtat
cgaacagacagatacagtggtgctttagcttttacattgcagtatctcaagataatgaaa
cttattgcagaggtatggaaattgatgtcctcgaaacatagttgtcctcgtagaattgga
gaatggggattcctattaggaaagctagaaaggaggctgaaagagttgagaagtagattc
attggattctctaaagaagaagaacgacatatcttagaactgatgctggtcacttgtaca
ctcaggttgtcaagtggagaagtttgttgtcatcttacaattctgagaaagttgtctacc
atagctaccaacatagaacatctccttaaggaagaatgtaaagagccatcaacttttgtt
tgtgaagttcaaagatcattgtcgaacttaggcaggattactcctaaagctcattgcagt
tcacctgattttagaaaactgctcaaatctttcacccttaaccatctagaaatttcagaa
aaccttgagcacgtcaaggcagaactagtcgttttggataacgactatgagaaacccctt
tattttgttccaggactacctgttggtattccttgccaaatcatcctgcacaatgttcga
agtaagaggaagttgtggtttagaatcacgatggataacatgacaagtcagtttatcttt
ttggatttcctttccttaggaggttgtgatgaggttagagaatttacgtacattgttccg
ttctatagaaccccaaaagcttcttcttttatagctaggatttgtataggacttgaatgt
tggtttgagaatactgaagttaatgaacgttgtggaggtccaaaacgtgatctagcatac
atttgcaaagagaaggaagtttatttctccatgatccacaaaggttga
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