Benincasa hispida (wax gourd): 120083783
Help
Entry
120083783 CDS
T07258
Name
(RefSeq) ABC transporter I family member 20 isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120083783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120083783
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120083783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
AAA_15
Arf
AAA_28
AAA_23
ORC-CDC6-like
AAA
nSTAND3
AAA_30
AAA_7
Sf6_terminase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
120083783
NCBI-ProteinID:
XP_038895579
LinkDB
All DBs
Position
8:24462349..24468437
Genome browser
AA seq
375 aa
AA seq
DB search
MPSSDPTIVIDRLRFTYPGIDGHPPPGSNPLIEDFSLTLNAGDRCLLVGSNGAGKTTILK
ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK
LIFGVGGVDPKRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD
LDVLARADLLKFLKRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE
ISKLSLMRTVESWLRKERDEERQRRRERKANGLPEFEERIEESRVTGDPARSAVRVINNG
WAAGRLNSTIAGEENFLFSSNRVLRQTAYSPTTINNDPTTLRRETNKTQTTLNNMLLVGI
STQVQYIMCFVDKKL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttccgaccccaccatcgttatcgaccgcctccgattcacttaccctggaatc
gacggccaccctccgcccggttccaacccacttatcgaagatttctccctcaccctcaat
gctggtgatcgttgccttcttgtcggatccaatggcgctgggaagaccacgatcttgaag
attttgggagggaagcatatggtggagccgcatatggttcgtgtgcttggaaggtcggct
tttcatgatactgctttgactgtttctggtgatctttgttatctaggaggagagtggagg
agagacgtggcctttgctggatttgaggttcccattcaaatggctgtatctgcagagaaa
ctaatttttggagtaggtggggttgatccgaaaaggagagctgaactcattaatatttta
gacattgatctatcatggacgatgcacaaggtgtctgatggtcagagaagacgggtgcaa
atatgcatgggtcttctcaaggcatacaaggttcttcttcttgatgagataactgtggat
cttgacgtgctggcaagggctgaccttttgaagtttctgaaaagggaatgtgaggaacga
ggggctacaataatttacgccacacatatatttgatggtcttgaagattggccatcacac
atggtctatgtgtcacatgggaagttgcagatctccatgccaatggataaaattaaagag
attagcaaattatctcttatgagaacagttgagagttggctaaggaaggagcgggatgag
gaacgacagaggagaagggaaagaaaggcaaatggtctgcctgaatttgaagaaagaata
gaggaaagccgtgtgactggggacccagcccgctctgctgttcgagtaataaacaacggt
tgggcagcaggacggcttaactccactattgccggagaagagaacttcttgttcagctca
aacagagttctcagacagacagcatatagcccaacaacaatcaacaatgaccctacaaca
ctgagaagagaaaccaacaaaacacaaactactcttaacaacatgcttttggttggcatt
tcaacacaagtccaatatataatgtgtttcgtcgataagaaattgtag
DBGET
integrated database retrieval system
