Benincasa hispida (wax gourd): 120085592
Help
Entry
120085592 CDS
T07258
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120085592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhj03000
]
120085592
Transcription factors [BR:
bhj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120085592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
120085592
NCBI-ProteinID:
XP_038897579
LinkDB
All DBs
Position
9:complement(91231901..91236335)
Genome browser
AA seq
570 aa
AA seq
DB search
MLFGSLLICSIAFCRGVCSFTERNKQKLRKGLLPFSADFGDFFRPEHDDLVELLWRNGQV
VLQSQKARKPSLIANEVRQFQKQNQPLYRSNVSCGNSSNLIQDDETVSWIQDPLDDSFEK
EFCSNFFSELPPADTIEIVKQPIKHFQDDKQTRFGAFDTATHVTFGNSVKKNSTPAALAE
FPMNTMPPPRFQFPDSVRQTKDLGDLGKLVNFSQVPVPVKGDLGSSNRGRESGNLIQGEG
RDCSAMTVGSSHCGSNQVPNPNDLDLSRVSTSGFGNAGLSAGLSKEDNRKMVAQGERDKT
ETMDPTATSSSGGSGSSMDRSRTIGQSTGGNSNKRKGRDGEESECQSETAELESAEGNKA
APRSGSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSL
QLQLQVMWMGSGMTPMMFPGIQHYMSRMAMGMGMAQPSMPSIHNSMQLPRVPIVDQSVSV
APTPNQPMMCQPQIFNPMNYQNQMQNPALQEQYARLMGFHHMQPTSQPINVFRFCPSAVL
QSQTAAAPGPASGPTAGGSITNDIVNGNLG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgctttttggttcattgcttatttgctccattgcattttgccgtggagtttgttcattt
acagagagaaacaaacagaaattaagaaaagggttacttccattttcagctgattttgga
gatttcttcagacctgagcatgatgatcttgtggaacttttatggagaaatgggcaagtg
gtcttacaaagccaaaaagctagaaaaccaagtctaattgctaatgaagtaaggcaattt
cagaaacagaatcaaccactttacaggagtaatgtgtcttgtggaaattcaagcaatttg
atccaagatgatgagacagtctcttggatacaagatccgcttgacgattcgtttgagaag
gaattttgttccaattttttctccgaattgccacctgctgatactattgagattgttaag
cagcctatcaagcatttccaagatgacaagcaaactagatttggtgcctttgatactgct
actcatgttacttttgggaattctgtgaagaagaactcgacgcctgcagctcttgcagag
tttcctatgaacacgatgcctcctccgagatttcagtttccagattcggtgcggcagacc
aaggatttaggagatttaggaaaattggtgaatttttctcaagttcctgtgcccgtgaag
ggtgatttgggatcatcaaacagggggagagagtctggaaacttgatacaaggagaggga
agagattgttcagcaatgacagttggttcgagccactgtggaagcaaccaagttcctaat
ccaaatgaccttgatctgagtcgagtttcgaccagtggttttggaaatgctggtttatct
gctggtctctccaaggaagataatagaaagatggttgcacaaggtgagagggacaaaact
gagactatggatccaactgccacttcatcctcaggcggttcgggaagtagtatggataga
agtagaacaattggacaatctactggaggtaacagcaacaaaagaaaaggccgagatgga
gaagaatccgaatgccaaagtgagactgctgaactcgaatctgctgagggaaacaaagca
gctccacgatccggatcttctcgcaggacccgtgctgctgaagtacataacctttcagaa
aggaggagaagagaaaggataaatgaaaagatgaaggcactgcaagaactcataccacac
tgtaataagactgacaaagcttcaatgctagatgaagccattgaatatttgaagtcactt
caattacaactacaggtaatgtggatgggaagtgggatgacgcccatgatgtttcccggc
attcaacattacatgtctcgaatggctatgggcatgggtatggcccaaccttcaatgcct
tcaattcacaactcgatgcaattacctcgggtcccgattgtcgatcaatcagtttcagtg
gctccaacaccaaaccaacctatgatgtgccaacctcaaattttcaaccccatgaattat
caaaatcaaatgcagaatcccgctttgcaagagcagtatgctcgtctaatgggtttccat
catatgcaacctacctcacagcccataaatgtgttcagattttgtccctcagcagtcttg
cagagtcaaactgcagcagcacctggccctgctagtggacctactgctggaggatctata
accaatgatattgtaaatggaaatttgggttga
DBGET
integrated database retrieval system
