KEGG   Benincasa hispida (wax gourd): 120087004
Entry
120087004         CDS       T07258                                 
Name
(RefSeq) ABC transporter I family member 19-like
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120087004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhj03019]
    120087004
Messenger RNA biogenesis [BR:bhj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     120087004
SSDB
Motif
Pfam: ABC_tran AAA_21 ORC-CDC6-like nSTAND3 AAA_29 AAA_28 AAA SMC_N AAA_24 AAA_23 NACHT AAA_15 AAA_16 AAA_18 AAA_5 AAA_30 SRP54 Rad17 nSTAND_NTPase5 AAA_22 AAA_25 PduV-EutP Zeta_toxin AAA_33 AAA_7 Arf ATP-synt_ab AAA_14
Other DBs
NCBI-GeneID: 120087004
NCBI-ProteinID: XP_038899774
LinkDB
Position
9:30628950..30634474
AA seq 302 aa
MADNGRNHGSEVVDEKSSTGIKVQGMQFSYECDSPLFVEFNLQIGSGSRCLLVGANGSGK
TTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKTVSSAGEVALQGD
FSAEHMIFGVEGTDPERRERLIDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLD
EVTVDLDVVTRMDLLDFLKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELRKSEKL
SEVDELKICANLLSVVETWLRAETKLEKKKKQPIHPPSNTQKNISPFGSSPFMSSRHMAY
YR
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcggacaacggaagaaatcatggtagtgaagttgtagatgagaagagttccaccggc
atcaaggtacaagggatgcaattttcttatgaatgtgattctcctcttttcgtggagttc
aatctccagattggctctggatctcgatgtcttctcgttggcgccaatggatctgggaag
acgactttgctgaaaattttggccggcaaacatatggttggaggaagagatgttgtccgt
gttctaaatggttcagcttttcatgacactcaacttgtatgtagtggtgatttggcctac
ttgggaggatcttggagtaaaaccgttagctctgcgggagaggttgcgttacagggagat
ttttctgctgaacatatgatatttggagttgaaggaacggatcctgaaaggagagagagg
ttgattgacctccttgatattgatctccagtggcgaatgcataaggtatccgatgggcaa
cgtcgtcgggtgcaaatctgcatgggcctgttgcatccttttaaggttctcttattagat
gaggtcacagttgaccttgatgtcgtcacgaggatggaccttctggacttcttgaaggaa
gagtgtgaccagaggggagctacaattgtttatgcaactcacatatttgatggactggag
acatgggcaactcatctggcatatattcaagatggtgagctaagaaagtcagagaagtta
tctgaagttgatgagttgaaaatttgtgccaatttgctttctgtggttgagacttggttg
cgtgctgaaaccaaacttgagaagaagaagaagcagccaattcaccctccatccaacact
caaaagaacatttctccttttggttcgtctcctttcatgtcttccagacatatggcttac
tatcgttag

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