Bacteroides helcogenes: Bache_2297
Help
Entry
Bache_2297 CDS
T01393
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03030
DNA replication
bhl03410
Base excision repair
bhl03420
Nucleotide excision repair
bhl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bache_2297
03410 Base excision repair
Bache_2297
03420 Nucleotide excision repair
Bache_2297
03430 Mismatch repair
Bache_2297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhl03032
]
Bache_2297
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_2297
Enzymes [BR:
bhl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Bache_2297
DNA replication proteins [BR:
bhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bache_2297
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Bache_2297
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bache_2297
MMR (mismatch excision repair)
DNA ligase
Bache_2297
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Bache_2297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
Auto_anti-p27
BRCT_2
DUF1266
TackOD1
Motif
Other DBs
NCBI-ProteinID:
ADV44265
UniProt:
E6STL8
LinkDB
All DBs
Position
complement(2801404..2803401)
Genome browser
AA seq
665 aa
AA seq
DB search
MTAKEKIDQLRADLHRHNYNYYVLNAPEISDKEFDSMMRDLQNLEKEYPEYQDNSSPTMR
VGSDLNKNFTQVMHKYPMLSLGNTYSENEVTDFYDRVKQSLNEDFEICCELKYDGTSISL
TYENGKLVRAVTRGDGEKGDDVTDNVKTIRTIPLLLHGNYPKLFEIRGEILMPWKSFEAL
NNEREAREETLFANPRNAASGTLKLQNSAVVASRKLDAYLYYLLGEELPCNGHYENLQMA
ASWGFKISEHMKKVHSLEEIFEYISFWDTERKNLSVATDGIVLKVNSLKQQKNLGFTAKS
PRWAIAYKFQAERALTRLNKVTYQVGRTGTITPVANLDPVQLSGTVVKRASLHNADIIEG
LDLHIGDMVYVEKGGEIIPKITGVNKEARGMLLGEKVKFITHCPECGSRLIRYEGEAAHY
CPNETACPPQIKGKIEHFICRKAMDIDGLGPETVDTFYRLGLIKDAADLYNLKADDIKGL
DRMGEKSAENIINGITASKEVPFERVLFALGIRFVGETVAKRIAKSFIDIEELANANLEV
LINIDEIGEKIAKSIVTYFCNPSNRKLVERLKDAGLQLFQKEEDLNEYTDRLAGQSIVIS
GVFTHHSRDEYKILIEKNGGKNTGSISAKTNFILAGENMGPAKLEKARKLGIKIMNEDEF
LALIS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaaagaaaagatagaccaacttcgtgccgatctgcatcggcataactacaat
tattatgtattaaatgctcctgaaatatctgacaaggaatttgatagtatgatgcgtgat
ctccaaaacttggaaaaggagtaccctgaatatcaggataacagttctccgacaatgcgt
gtaggaagtgatttgaataaaaactttacgcaagtaatgcacaaatatccgatgctttca
ttaggaaatacttattctgaaaatgaagtgacagatttctatgaccgagttaaacagtct
ctaaacgaggattttgaaatttgttgcgaactgaaatatgatggaacctcaatctcttta
acttatgaaaatggcaaattggtacgtgccgtcactcgaggagatggtgagaaaggtgat
gacgttacagacaatgtaaaaaccatccgtaccataccacttttacttcatggaaattat
cctaaattatttgagattagaggagaaatattaatgccttggaagtcatttgaagctctg
aacaatgaaagggaagcaagagaagagactttgtttgccaatcctcgtaatgcggcgtca
ggtacattgaagttacaaaattcggctgttgttgcatctcgcaaattagatgcttattta
tattacttattaggagaagaattgccttgtaatggacattatgagaatttacaaatggca
gccagttggggattcaaaatatcggagcatatgaaaaaagtgcatagcctggaggaaata
ttcgaatatatcagcttttgggataccgaacgtaaaaacctatcagtagcaacagatggc
attgttttaaaagtaaacagcttgaaacaacagaaaaatcttggttttactgcaaaatct
cctcgttgggccattgcatataaatttcaggctgaacgtgcattgactcgtctgaacaaa
gtaacctatcaagtggggcgtactggtacaatcactcctgttgccaatctggatccagta
caactatcaggaacagtggtaaaaagagcctctttacacaatgcagacatcatcgaaggc
ttggatcttcacatcggagatatggtttatgtggaaaaaggaggagaaattatacctaaa
atcactggcgtaaataaagaggcacgaggcatgctacttggagaaaaagtgaaatttatt
actcattgccctgaatgtggcagcagattaatacgctatgagggtgaagcagcgcattat
tgtcctaatgagacagcttgccctccacaaataaaaggcaaaatagagcatttcatctgc
cgtaaagcaatggatatagacggactggggccagagactgtagatactttctatcggtta
ggtttgataaaggatgctgcagacttatataatctcaaagcagatgatattaaaggcttg
gatcgcatgggagagaagtctgcggaaaatattataaatgggattacagcgagtaaagag
gttccttttgaacgagtattgtttgcattgggcattcgctttgtaggagaaaccgtagcc
aagagaatagctaaatcattcatagatatagaagaacttgccaatgccaatcttgaggtt
ctaataaatattgatgaaattggtgaaaaaatagcgaaaagcattgtaacttatttctgc
aatccatcgaaccgtaaactggtggaacgactgaaagatgccggattacaactctttcaa
aaagaagaagatttaaatgaatataccgataggttagcaggtcagtccatcgttatcagt
ggtgtatttacacatcactctcgtgatgaatacaaaattcttattgaaaagaatgggggt
aaaaatacaggcagtatttctgccaaaaccaattttatattagctggtgaaaatatggga
cctgccaaattagaaaaagcacggaaattgggaataaagatcatgaatgaagatgagttt
ttagcgttgatttcctaa
DBGET
integrated database retrieval system
