Bordetella holmesii ATCC 51541: D560_3764
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Entry
D560_3764 CDS
T03052
Name
(GenBank) radical SAM superfamily protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00790
Folate biosynthesis
bho01100
Metabolic pathways
Module
bho_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
D560_3764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bho03016
]
D560_3764
Enzymes [BR:
bho01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
D560_3764
Transfer RNA biogenesis [BR:
bho03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
D560_3764
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AHV91742
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All DBs
Position
3505470..3506102
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AA seq
210 aa
AA seq
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MTYSAKEIFKTLQGEGAQAGRAAVFCRFSGCNLWSGRERDRATAACTFCDTDFVGTDGEG
GGKFRDAAALAATLADTWGPETAGRYVVFTGGEPLLQLDAALIAAVHAQGFTIAIETNGT
LPVPAGVDWICVSPKGKAPVVQTRGQELKLVFPQADTPPEAFANLDFEHFFLQPMDGPQR
LANTEAAVTYCMAHPQWRLSVQTHKYIGIP
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgacttactccgccaaagaaattttcaagacgctgcagggcgaaggcgcccaggctggg
cgcgccgcggtgttctgccgtttttcgggctgcaatctctggtctggccgcgaaagagac
cgcgcaaccgctgcctgtaccttttgcgataccgatttcgtcggtactgacggcgagggc
ggcggcaaattccgtgacgctgcagcgcttgctgcgacgctcgctgacacctggggcccc
gagaccgccggcaggtatgtcgtcttcacgggaggggaacccttgttgcaactcgatgct
gccttgatcgcggcagtgcatgcgcaaggctttaccatcgccatcgaaaccaatggcacc
ctacccgttccggctggtgtggactggatctgcgtcagccccaagggcaaggcacccgtg
gtgcagactcgcggccaagagctcaaactggtgtttccgcaagccgatacgccccccgaa
gcatttgccaatctcgatttcgagcatttcttcctgcagcccatggatggcccgcagcgg
ctggccaataccgaagcggcagtgacttattgcatggcgcatccgcaatggcggctgagc
gtgcaaacccataaatacataggcattccatga
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