KEGG   Bordetella holmesii ATCC 51541: D560_3764
Entry
D560_3764         CDS       T03052                                 
Name
(GenBank) radical SAM superfamily protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
bho  Bordetella holmesii ATCC 51541
Pathway
bho00790  Folate biosynthesis
bho01100  Metabolic pathways
Module
bho_M00988  PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:bho00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    D560_3764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bho03016]
    D560_3764
Enzymes [BR:bho01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     D560_3764
Transfer RNA biogenesis [BR:bho03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    D560_3764
SSDB
Motif
Pfam: Radical_SAM
Other DBs
NCBI-ProteinID: AHV91742
LinkDB
Position
3505470..3506102
AA seq 210 aa
MTYSAKEIFKTLQGEGAQAGRAAVFCRFSGCNLWSGRERDRATAACTFCDTDFVGTDGEG
GGKFRDAAALAATLADTWGPETAGRYVVFTGGEPLLQLDAALIAAVHAQGFTIAIETNGT
LPVPAGVDWICVSPKGKAPVVQTRGQELKLVFPQADTPPEAFANLDFEHFFLQPMDGPQR
LANTEAAVTYCMAHPQWRLSVQTHKYIGIP
NT seq 633 nt   +upstreamnt  +downstreamnt
atgacttactccgccaaagaaattttcaagacgctgcagggcgaaggcgcccaggctggg
cgcgccgcggtgttctgccgtttttcgggctgcaatctctggtctggccgcgaaagagac
cgcgcaaccgctgcctgtaccttttgcgataccgatttcgtcggtactgacggcgagggc
ggcggcaaattccgtgacgctgcagcgcttgctgcgacgctcgctgacacctggggcccc
gagaccgccggcaggtatgtcgtcttcacgggaggggaacccttgttgcaactcgatgct
gccttgatcgcggcagtgcatgcgcaaggctttaccatcgccatcgaaaccaatggcacc
ctacccgttccggctggtgtggactggatctgcgtcagccccaagggcaaggcacccgtg
gtgcagactcgcggccaagagctcaaactggtgtttccgcaagccgatacgccccccgaa
gcatttgccaatctcgatttcgagcatttcttcctgcagcccatggatggcccgcagcgg
ctggccaataccgaagcggcagtgacttattgcatggcgcatccgcaatggcggctgagc
gtgcaaacccataaatacataggcattccatga

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