Bacteroides parvus: JXR92_004870
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Entry
JXR92_004870 CDS
T08258
Name
(GenBank) chondroitinase
KO
K08961
chondroitin-sulfate-ABC endolyase/exolyase [EC:
4.2.2.20
4.2.2.21
]
Organism
bhum
Bacteroides parvus
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
JXR92_004870
Enzymes [BR:
bhum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.20 chondroitin-sulfate-ABC endolyase
JXR92_004870
4.2.2.21 chondroitin-sulfate-ABC exolyase
JXR92_004870
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lyase_catalyt
Lyase_N
Lyase_8
Lyase_8_C
Motif
Other DBs
NCBI-ProteinID:
UDB45000
LinkDB
All DBs
Position
1238358..1241444
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AA seq
1028 aa
AA seq
DB search
MMQFSKWKIGAAALVCMLLPGSVHAQIVKNERLLSFEERQVPAFVTTAAGSQLGISDEHY
RDGDHSLSWTFEPGAALSIKKDLKFEKKDPTGKDTYLSAFIVWVYNEQAQDKQIRFEFLK
DGKVCTSFPFGINFTGWRGAWVCYERDMQGTPEEGMDEIRIVAPDVKGKLFFDHLITASK
VDARQQTADLQVPFVNKGTTNHWLIIYEHSLWKPDIPLTDVTEAQKQDIRIMEKRFRDML
YTPSALSEKEMQSIRKKYDFYRITYKNGKVAGRPIYFVRHSEAYERMVPDWDKDMFSRLG
IEISDYFNLMKRIAIAYDNAEDAALKHELKQKFIAMYDNATDQGIAYGSCWGNIHHYGYS
MRGLFVSYFLMKDVLREAGKLEEAVRTLNWYAITNEVYPEPAVNGIDIDTFNTKLQGRIA
SILIMEDTPEKLQYLRSFSRWLDKGCLPAPGLAGSFKQDGACFHHCNNYPAYAVGGLDGA
TNMIYLLSGTEFRLSEQAHETVKKVLLTMRFYCNLKQWPLSMSGRHPNGGGSLIPIQYAT
MAIAGTPDGKQKYDPEMAAAYLRLVAYTEAPDKNAPDYLPKASTRHELEMKKLLEAQGFR
PEPDPQGNLALGYGCVSVQRRDNWAAVVRGHSRYLWAAEHYLPANFYGRYLAHGSMQILT
GKPDEMVTFATSGWQEAGFDWNRIPGVTSIHLPFDQLRARVLNVDTFSGMEEMLYSDEAF
AGGLSQAHLNGNFGMVLHEHDKYNGSHRARKSFHFFDGTIVCLGTDIENLNTEYPTETTV
FQLAATTPETRQYWESYQSDGQTYIDPNGVGYYISKASRPAARYEKNFPQVTVGERSTKP
TSGDWVSLTLQHGKAPKGASYEYAVLPHTDAAALKAFAKKPTYKILRQDRNAHIVRSPAD
GLTSYVLFETPQTLPDGGLLQKADTSCLVMIREYKDKLLLTVSQPDLALYRGPSDEAFDK
DGKRIERSIYSRSWTDNESQEIPVTVTLKGQWKVTETPYCKVVSADKKQTVLRFTCRDAA
SLEVELKR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaattcagtaaatggaaaataggagcggcagcgctcgtttgcatgttgctgccg
ggcagtgtacatgcgcaaatcgtgaagaatgagcgtttgctttcttttgaggagagacag
gttccggcgtttgtcactacggcagccggttcgcagttgggcattagcgacgaacattat
agggacggcgaccacagtttgagctggactttcgagccgggtgccgcactgtccatcaag
aaagacttgaagtttgagaagaaagacccgacggggaaagacacctatctttcggctttc
atcgtatgggtgtacaatgagcaggcccaggacaagcagattcggtttgagttcttgaag
gatggcaaggtatgcacctcttttccttttggcatcaacttcaccggttggcgcggagca
tgggtatgttatgaacgcgatatgcaaggtaccccggaagaagggatggacgaaatccga
attgtagcccccgacgtgaaggggaaactctttttcgaccatctgattactgccagcaag
gtggatgcccgccagcagactgccgacttacaggtaccgtttgtaaataagggaaccacc
aaccactggctgattatctacgaacactccttgtggaaaccggacatccctctgacagac
gtgaccgaggcgcagaagcaggatatacggattatggagaaacgtttccgcgacatgctc
tacacgccttccgcactttcggagaaggagatgcagtccatccgtaagaagtatgatttt
tatcggattacctacaagaacggcaaggtagcaggacgtcctatctatttcgtacgtcac
tccgaggcatacgaacgtatggtacccgattgggacaaagatatgttctccagactgggg
atagagataagcgactatttcaacctgatgaaacgcatcgccatcgcctacgacaatgcg
gaggatgcggcgctgaaacacgagttgaagcagaaattcatcgccatgtacgataacgcc
accgaccagggtattgcctacggcagttgctggggaaatattcaccattacggatatagt
atgcgcggtctgtttgtgtcttatttcttgatgaaggacgtgttgcgtgaggctggtaag
ctggaagaggcggtacgtacgctcaactggtatgccatcaccaatgaggtatatcccgaa
cctgccgtcaacggtattgatatagatacgttcaacaccaagttgcaaggccgcatagcc
agcatcttgattatggaagatacaccggagaaactgcaatacctgcgttccttctcccgt
tggctggacaaaggctgccttcctgcgccgggactggccggttctttcaagcaggacggt
gcctgcttccatcattgcaacaattatcctgcctatgcagtgggcggtctggacggtgcc
actaatatgatttacttgctgagtggtaccgagttccgcctgtccgagcaggcacacgag
acggtgaagaaagtgcttctcaccatgcgtttctattgcaacttgaagcaatggcctctc
tccatgtccgggcgccatcccaacgggggaggaagcctgatacctatccaatatgccacg
atggccattgccggtacgccggatggcaagcagaaatatgaccccgaaatggctgctgcc
tatctgcgcctggttgcctatacagaagctccggacaagaatgcgcccgactatctgccg
aaggcttctacccgccacgaattggaaatgaagaagttgctcgaagcccaaggcttccgt
ccggaacccgacccgcaaggcaatctggctttgggttacggttgtgtatccgtacagcgt
cgtgacaactgggctgccgtagttcgcggacattcccgttatctctgggctgccgagcac
tatcttcccgccaacttctatggccgttatctggcacatggcagcatgcagattcttacc
ggaaaacccgatgaaatggttacttttgccaccagtggctggcaggaagccggtttcgac
tggaatcgtattccgggtgtcacgagcatccatctgcctttcgaccagttgcgtgcccgg
gtattgaatgtcgataccttctccggtatggaggagatgctctattccgatgaggctttt
gccggcggtttgtcccaggcacatctgaacggtaacttcggtatggtgctgcatgaacat
gataagtataacggttctcaccgtgcccgcaagtcgttccacttcttcgatggcaccatt
gtatgcctcggtacggacatcgaaaacctgaataccgaatatcctacggaaactaccgtg
ttccagcttgccgccaccactcccgaaacccgtcaatactgggagtcctatcagagtgac
ggacagacttatatagaccctaacggcgtaggttattacatttccaaagcctcccgccct
gctgcccggtacgagaagaactttccgcaagtgaccgtgggcgagcgtagcaccaagcct
acttccggtgattgggtgtccttgacattgcaacatggcaaagccccgaaaggcgcttcc
tacgaatatgcagtgctgccccacacggatgctgccgctttgaaggcattcgccaagaaa
cccacttacaagattctccggcaagaccgcaacgcccatattgtacgctctccggcagac
ggtcttacttcttacgtcttgttcgagacgccgcagactctgcccgacggtggattgttg
cagaaagccgatacatcgtgccttgtcatgatacgcgaatataaggacaagcttcttctg
actgtctcccagcccgacctggccttgtatcgcggtccgagtgacgaggctttcgacaaa
gacggaaaacgtattgagcgcagtatctattcacgctcgtggactgacaatgagagtcag
gagattcccgtaaccgttactttgaagggacagtggaaggttaccgagacgccctattgc
aaggtggtgtcggcagacaagaagcagacagtgttgcgctttacttgccgggatgctgca
agcttagaggtagagttaaagaggtag
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