Bidens hawaiensis: 143602053
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Entry
143602053 CDS
T11418
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhw03036
]
143602053
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143602053
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
143602053
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
143602053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
Motif
Other DBs
NCBI-GeneID:
143602053
NCBI-ProteinID:
XP_076935416
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MDGKRQLLTPQKRPNEDSGTRQFNKRTPGSGGGVGSQGVYKLKVLLPNGMTVLVKIPEGT
EFITVRELVNRVKQQCNRAQKTSNPKKNVRWDADLCFIDDYDRVFKSSIKLIRLEMNKVY
TLRLDDGSQPSTIFENMWDLTPDTELLMELPEEYTFETALADLVDNSLQAVWTNDEGDDR
LISVEVSNEKISIFDTGSGMDSTSIEKWGKMGASLHRSYRTQAIGGKPPYLKPAFGMFGY
GGFIASMHLGRRTEVSSKTKTSKKVYMLCLERDALVGGSVSGSKGSWRTYGGLRNPTKEE
LELSPGGSFTKVEIFEPKMRSTNIRRLKCKLKDIYFPYIQCDDLSKKGKTSTPIEFEVNG
VNLAEIPGGEVAITNLSSCNGPEFVLQVRFKLKHGNATMTSSQGTRPSDEANARLTCVYL
PVKEGKESIERVLDALKEDGYDYTEEFGSFRHVSCRRLGRLLPDARWAWLPFMDFRQRSM
NISQVFLKRSSMRVKCFIETDAGFSPTPSKTDFAHQNPFTTALRNLGSKQSLEKDSDMYS
LTDVDVDIRRDGKSLNLTQLDKQYQMWLKDMHDRYDEEGDSGIDEPVLIVNPSDKKALHI
SNNVVRVHKAFRRKEKIWKSGQKIKILKGACGGFHKQNVYATLEYSLFEGFQGDAAGDAW
MICRTIDIPEKDGCLLESVEENPKFELQKSVSIPMSVIDSGKCLAVDDSKWNKQMEKQYQ
KFPSTIEILTSRQCRELGLESSLPDESETYATDVSPAEIVAVIRPGTYKSGTPSKHLDQK
YVMKDNFEMSLVITYYAIKKPQDETNIYSGRVVASTLRDLQGLYVFKPKCKSHPLFQKAG
IYTFTFSIRDSSCEKCVVKVQVKPSREVHRWALAKNSQYNLTVGCPCKPISVLMFDQYDN
QIPFLELPDVSIQINCQDAARVILNDWCPSLSIDKLGLVIEDLIIESSDLDSIRPSYDAT
MVLTLTDSHLLDIPIKVLPGCVQRFTVQPENFVKQLIPGIVIQDLNLELFDAHGNHVQEN
TKVELRVDGFRWLKRSSAKKVDACGCIDLGCFLKVSEGYSGKSVSLAVCSNEETPIRKEW
QIEKRQLRISSEIPERCFAGSQLEHLVFEVVNSKGEVDVNFHDEDGNHGIRQSHTLVIKS
HCMEIDESVKYAFREGRCIVRAVPVPSEEGEFTFVAVHSNCPDLQLTCKVMIDLPLETEP
VNISHNLNVHSVVETETPLDYRSPLYHTPKTMDTCPATAKQHEAYIDNFYQLEKDLYNEI
HEIGLRIGKLEPEIKKLEEAIEVNLSECEGLRDQILSIGTHVPLGKNKIMERVESKSDCA
GSLVMKHLNAMQDRDRHGVMGNIIGIVALLGTTSTFELSRLFAEYLGDQMLAVVCKHYED
VHLLEGYDKKGRLNPDFALQMFARELGQSINGRYHVLCIEDIRACGADKDAEGKLLFPDP
TLPCGSRPAGFLGYAVNLVNIDDDHLDTVTDSGFGLRETLFYRLFGETQVYETRDDMTRA
VSCIKDGAVSLDGGILRGNGAVSLGCLEPDVIFPVVPARNRLLSEEDKRELDRYRELKLK
LKQMIATLSKNRKSLECEKGRFKERYDLYVKYFT
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaaacgtcagcttctaacgcctcaaaagcgaccaaatgaggattcaggcaca
cggcagtttaacaagaggacgccgggttccggtggtggtgtaggtagtcagggagtttac
aagctgaaagttctcttgccgaatggaatgactgtactggtgaagatacccgaaggaact
gagttcattactgttagggagctggtcaacagagtgaaacaacagtgtaatagagcacaa
aaaacatcaaaccctaagaagaatgttagatgggatgcggatttgtgttttattgatgat
tatgatcgtgtttttaaaagtagcatcaagttaataagattagagatgaacaaagtctac
actctcagactagatgacgggtctcaaccgtcaactatctttgagaatatgtgggattta
actcctgatacagagttgctgatggagttgcctgaagagtatacatttgaaactgcattg
gctgacttagtagacaattctttacaagccgtgtggacaaatgatgaaggagatgatagg
ttaataagtgttgaagtttcaaatgagaaaatatctatttttgacacaggctcgggcatg
gactctacttccatagagaagtggggtaagatgggagcttccctccacaggtcatacaga
acacaagccattggtgggaagcctccatacttaaagcctgcctttggcatgtttggatat
ggtggctttattgcatcaatgcatttaggaaggcgcacagaagtttcctccaagacaaaa
accagtaaaaaagtttatatgttatgtcttgagagagatgctcttgtcggtggttctgtt
tctggttctaaaggatcctggaggacttatggtggtcttcgaaaccccacaaaagaagaa
cttgaattatctcccgggggaagtttcacaaaggttgagattttcgaaccaaagatgaga
agcactaacataaggcggcttaaatgcaaattaaaggatatttatttcccctatattcag
tgtgatgacttgtccaagaaggggaaaacttctacgccaattgaatttgaggttaatgga
gttaatctagctgaaattccgggtggggaggttgcaattacaaatctatcttcatgcaat
ggcccggaattcgtgctacaagttcgttttaaattgaagcatggcaatgctactatgaca
agtagtcaaggaacaagaccatctgacgaggcaaatgcacgccttacgtgtgtgtatctt
ccagttaaagagggtaaagaaagcattgagagggttttggatgctttgaaagaagatgga
tatgattacactgaagaattcggaagttttaggcatgtttcttgtagacggctaggtcgt
ctactaccagatgctcgttgggcatggcttccattcatggatttcagacaaagaagcatg
aacatatcacaagttttcttaaagagaagctccatgagagttaaatgttttattgagacg
gatgctggtttcagcccaacgccctcgaagactgattttgcacatcaaaacccttttact
actgcacttaggaacttgggcagcaaacaatcattggagaaagattcggatatgtattca
ttaacagacgttgacgttgacattagaagagacggaaaatcattgaacctaacacaactg
gataagcagtaccaaatgtggcttaaggatatgcatgacaggtatgatgaagaaggcgat
tctggaattgatgaacctgttcttatagtaaacccttcagataaaaaggctcttcacata
tccaataatgttgtgagagttcataaagcttttaggcggaaagagaaaatatggaaatca
gggcagaaaatcaagattctgaagggagcatgtggtggattccacaaacagaatgtctat
gctacattagaatacagcctctttgaagggtttcaaggggatgctgctggggatgcgtgg
atgatatgcaggactattgacatcccagaaaaagatggctgtctcctagaatctgtggag
gaaaatccaaaatttgaattacaaaaatctgtatcaataccaatgagtgtcattgattct
ggaaagtgtttagcggttgatgattctaaatggaacaaacaaatggagaagcaataccag
aaatttccttcaacaattgagatattaacttcaaggcaatgtcgtgagttgggcctggaa
tcgtcattacccgatgaatctgaaacttatgcaactgacgtatcacccgctgaaattgtt
gctgtgattcgtcctggtacttacaaatccgggacaccttccaaacatctagatcagaaa
tatgtgatgaaagacaactttgagatgtcgctggtgattacatattatgcaatcaagaaa
cctcaggacgaaaccaatatttattctggacgtgtagtcgcctcaacattaagagacttg
caaggtttatatgttttcaaaccaaaatgcaagtcacatcctctgtttcagaaagccggc
atttatacattcactttttccattagagattcaagttgtgaaaaatgtgtggtgaaggtc
caagtgaaaccttcacgtgaggtccacagatgggcgcttgccaagaactctcaatataat
ttaacggtgggttgtccatgcaagcccatttctgtattaatgtttgatcaatacgataat
caaattccgttcttggaacttccggacgtgtcgatccagatcaactgccaggatgctgct
agggttatccttaatgattggtgcccatctctttctatagataagttaggcttagtgata
gaggatttgattattgagagctctgatttggacagcattcgaccaagttatgatgccacc
atggtgttaactctgactgactcgcacttattagatatccccatcaaagttcttcctgga
tgtgtacaaaggttcacagttcaaccagaaaactttgtgaagcaattgattccaggcatt
gtaattcaagatctgaatctggagttatttgatgcacatggaaatcatgtacaagaaaac
actaaggtggagttgcgtgtggatggctttcgttggttgaagcgttcttctgctaagaag
gtagatgcttgtggatgcattgatcttggttgctttttgaaggtttctgaaggctattct
ggaaaaagtgtatcactggctgtttgttcaaatgaagaaacacctattagaaaagagtgg
caaattgagaaaaggcagttgcggatttcatcggagatacccgaaagatgttttgctggt
tcccaacttgaacacctggtgtttgaagttgtaaattccaagggtgaagtggatgtaaac
tttcatgatgaagatgggaatcatgggattagacaatcacatactcttgtgattaaatca
cattgtatggagattgatgaatctgtcaaatatgcgtttcgtgaaggccggtgtatagtt
cgtgcagttcctgttccttcagaggaaggggagtttacttttgtggctgttcattctaat
tgccccgacttacagctgacctgtaaggttatgattgatcttcctctggagacggagcct
gttaatatcagtcacaacttaaatgtccactcagttgtagaaacagagacacctctagat
tacaggagtcccctatatcatacaccaaagacaatggatacgtgtcctgctacagctaag
caacacgaagcttatatagataatttttatcagttagaaaaggacctctataacgagatt
catgaaattggtttgaggattgggaaacttgaaccggaaatcaaaaagcttgaagaagca
attgaggtcaacctgtcagaatgtgaaggtctcagggaccaaattcttagtattggcacg
catgttccactggggaaaaataaaataatggaacgagttgaatctaagtctgactgtgct
ggttctctagtcatgaaacacttgaatgcaatgcaagaccgagatcgtcacggtgtaatg
ggaaatattattggcattgttgcacttttggggacaacttccacttttgagcttagcagg
ctatttgccgagtatcttggtgatcaaatgcttgccgtcgtatgcaagcattatgaggac
gtacatttacttgagggttatgacaagaaggggaggttgaatcctgattttgcacttcaa
atgtttgcacgagaacttggtcagtcgataaatggtcgataccatgttctttgcattgaa
gacataagggcatgcggggcagataaagatgcagagggaaagcttttgtttcctgatcca
acccttccatgtggatctagaccagcaggctttttggggtatgctgtgaatttggtgaat
atagacgatgatcacttggacaccgtaacagattctggttttggccttcgagagacttta
ttttatcgtctttttggcgagacacaagtttatgaaaccagagatgacatgacacgtgca
gtctcatgtataaaagatggtgctgtttcgttagatggtggaatactaagaggcaatgga
gcggtgtctctaggatgcttggaacccgatgttattttccctgtggtacctgcaagaaat
cgactcctctctgaggaggacaaacgagagttggatcgttatagggagctgaagttgaaa
ctgaaacagatgatcgctacgctgtctaaaaacaggaaatccctcgaatgtgaaaaggga
aggttcaaagagagatatgatttgtatgtcaagtacttcacttga
DBGET
integrated database retrieval system
