Brachyspira hyodysenteriae JR80: JR80WH_001003
Help
Entry
JR80WH_001003 CDS
T11265
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bhyj Brachyspira hyodysenteriae JR80
Pathway
bhyj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JR80WH_001003 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhyj03400
]
JR80WH_001003 (nth)
Enzymes [BR:
bhyj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JR80WH_001003 (nth)
DNA repair and recombination proteins [BR:
bhyj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JR80WH_001003 (nth)
Prokaryotic type
JR80WH_001003 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
XOZ56152
LinkDB
All DBs
Position
complement(1184712..1185401)
Genome browser
AA seq
229 aa
AA seq
DB search
MNDNDIHPIMKELTKVTKEMPMPVVTEIKLLTNRDAYKILISTMLSLRTKDPTTRDASMR
LFEKAGNPKDMLKLSEEEIAKLIYPVGFYKVKAKNILEVSQMIIDDFKGQVPDEIDELLK
LKGVGRKVANLVVTEAFDKDGICVDTHVHRISNRFGYVNTKTPEETEFALRDKLPKEYWR
VYNDTLVVYGQNLCKPISPLCSKCTVSQYCDYFKNEYKDTKEKKSSKKK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataatgatattcacccaataatgaaagagcttacaaaagttactaaagaaatg
cctatgcctgttgtaactgaaataaaattattaacaaatagagatgcttataaaatttta
atatctacaatgctttctcttagaacaaaagatcctacaacaagagatgcttctatgaga
ttatttgagaaagcaggtaatcctaaagatatgcttaaactttcagaagaagaaattgca
aagttaatatatcctgtaggtttttataaagtgaaagctaaaaacatattagaagtatct
caaatgataatagatgattttaaaggacaagttcctgatgaaatagatgaacttttgaaa
ctcaaaggtgttggaagaaaggttgccaatttagtagtaactgaagcttttgataaagat
ggtatatgcgtagatactcatgttcatagaatatcaaatagatttgggtatgttaataca
aaaactcctgaagaaacagagtttgcattgagagataaattacctaaagaatattggaga
gtttataatgatactttagttgtttacggacagaatttatgcaagcctatttctccatta
tgctcaaaatgtacagtttctcagtactgcgattatttcaaaaatgaatataaagatact
aaagaaaaaaaatccagcaaaaagaaataa
DBGET
integrated database retrieval system
