Brachyspira hyodysenteriae JR80: JR80WH_001858
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Entry
JR80WH_001858 CDS
T11265
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bhyj Brachyspira hyodysenteriae JR80
Pathway
bhyj01501
beta-Lactam resistance
bhyj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JR80WH_001858
01503 Cationic antimicrobial peptide (CAMP) resistance
JR80WH_001858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhyj03036
]
JR80WH_001858
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhyj02000
]
JR80WH_001858
01504 Antimicrobial resistance genes [BR:
bhyj01504
]
JR80WH_001858
Chromosome and associated proteins [BR:
bhyj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JR80WH_001858
Transporters [BR:
bhyj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JR80WH_001858
Antimicrobial resistance genes [BR:
bhyj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JR80WH_001858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
YknX_C
BSH_CzcB
Biotin_lipoyl
Beta-barrel_AprE
CSD2
Motif
Other DBs
NCBI-ProteinID:
XOZ56980
LinkDB
All DBs
Position
2150928..2152187
Genome browser
AA seq
419 aa
AA seq
DB search
MMRRVSIIILSFVLILSVLSISCKKAAVDLKKKENPISVLVAAPIKQPLEEYLDLSAEIK
AIKEVEISSDVPGKIANILKYEGSFVNKGDTIALIDRFVIGANYAYAPARTPISGYVTTT
YMAVGASIAASTPIANVADISQLEVEIQVPERSIAGIELGQKVIIRVPSAPNKEIEATIT
KRDYAVNPSTRTLMVKALIDNKERLLLPGMFSDVSILLNSADNVFVIPNSAMFSDDLGKN
YIYVVKEDTSNNPPSEVKAANSTNAQYRAYTREVNVLFTSKDKVALSGGLEEGEEVVMFG
REFLKNGSLVNRIENDPTILEYITPPTAVASADTNIINNTASAKPATTKPAANTNTTVKN
NTTTQKPAAVAKPTTTKPAATVRNNTPAAEKPNTTTTVEKPKEPETNTSNNDTIYSVGG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaagagtaagtattataatattatcatttgttttaattttatccgttttatct
atttcatgtaaaaaagctgcagtagatctaaagaaaaaagaaaatcctataagtgtattg
gtggcagcacctataaagcagcctttagaggagtatttagatttatcagctgagattaag
gctataaaagaggtagagatatcctctgatgtacctggaaaaattgctaatatattaaaa
tatgaaggaagttttgttaataaaggcgatacaatagcattaatagacagattcgtaata
ggtgcaaattatgcctatgctcctgcaagaactcctatttctggatatgttacaactaca
tatatggcagtaggcgcctcaatagctgcttctactcctatagcaaatgttgctgatatt
agccaattggaagtggaaatacaagttcctgaacgttctatcgcaggaatcgaattagga
caaaaagtaattataagagttccttcagcacctaataaagaaatagaagctactatcact
aaaagagattatgcagttaatccttcaactcgtactttaatggtaaaagctttgatagat
aataaagaaagacttcttttacctggaatgttttctgatgtatcaatacttttaaactct
gctgataatgtatttgttataccaaacagtgctatgttcagcgatgatttaggtaagaat
tatatatatgttgttaaagaagatacttcaaacaaccctccatcagaagtaaaagcggca
aattcaactaatgctcaatatagagcatatacaagagaagttaatgtattatttacttct
aaagataaagtggctttaagcggaggacttgaagagggagaagaagttgtaatgttcgga
cgtgaattcttgaaaaacggatcattagttaatagaatagaaaatgaccctactattttg
gaatatattacgcctcctactgcagttgcttcagctgatactaatataataaataatact
gcttcagcaaaacctgctactacaaaaccagcagcaaatacaaatactactgtaaaaaat
aatacaacaactcaaaaaccagctgctgtagcaaaacctactactacaaaaccagcagct
actgtaagaaacaatactcctgctgctgaaaaacctaatacaacaactacagtagaaaaa
ccaaaagaaccagaaacaaatacttctaataatgatactatatactcagttggaggttga
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