Bradyrhizobium icense: LMTR13_04960
Help
Entry
LMTR13_04960 CDS
T04485
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
bic
Bradyrhizobium icense
Pathway
bic01501
beta-Lactam resistance
bic01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LMTR13_04960
01503 Cationic antimicrobial peptide (CAMP) resistance
LMTR13_04960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bic02000
]
LMTR13_04960
01504 Antimicrobial resistance genes [BR:
bic01504
]
LMTR13_04960
Transporters [BR:
bic02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LMTR13_04960
Antimicrobial resistance genes [BR:
bic01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LMTR13_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Patched
MMPL
Prominin
Motif
Other DBs
NCBI-ProteinID:
ANV99624
UniProt:
A0A1B1UA34
LinkDB
All DBs
Position
complement(1030528..1033614)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNMATWSIRNPIPAIMLFAVLALAGFWGFKVLPIQSFPDLDLPVVNVTLIQPGAAPSQLE
TEVARKVEDSLATLGGLKHLRTSITDGQVAIRVEFVLEKNLSEALIETKDAVDRVRSELP
LDVQPPTVSAQRAGSNALLVYAISSTRFDEEALSWFVDDTIAKIILGVPGIGRFERVGGV
QREVRVEVDPVPLAALGLTAADVSRALRQVQQQSSGGRAQLGQNEQAVRTTAIVRQASDL
AALPITLAGAPKVRLDQVADVQDTIADRTQVALLNGEPVVGFRIFRAKGFDEASIADAVR
KAMEQLQSTDPTLHIKQISGSIDYTREQYAGSMHMLYEGALLAILVVWWFLRDWRATLIA
GAALPLSILPAFAAMAWLGYSLNTVTLLALAVIVGILVDDAIVEIENIERHRAMGKPMRE
AASEAVTEIGLAVVATTMTLVVVFLPTALMSGISGMLFKQFGWTAVIAVLASLLVARLLT
PMMAAYLLKSRPSTEHKDGPLMTTYLRAVSWCLGHRKTTAAGTILFFVASLALIPLIPTG
LIPPADRGSTTVNIELPPGSSIQNTLRVAEDVRAALKDVPGIDNVFTTVGDSQQLGPGAQ
QAGEVRRGAMVLMLAPRGQREGQVAIENLVRPRLLAIPGARFAIGSGGLGEKIQFILSSD
NVEALRASAEALEQELRGVGGFTNIKSTASLERPEVIVRPDLLRAADRGVSTASIGDVVR
IATSGDFNTQVARLNLDSRQVYIRVRVADAARQKIDTLVNMRVNGRNGPVPLSSVAAISV
ESGPSQIDRYDRRRYVTVEADLGGMALGTAQARAMALPAIQNLPSAVNLIRTGDSELAGE
LAAGFGMAIVIGIVSMFCVLVLLFKDFLQPVTILSALPLSVGGAFVALLIARSQLNLPVM
IGFVMLMGIVAKNSILLVEYAVVGIRERGLSMHEALVDACHKRARPVVMTTIAMIAGMLP
IALGFGADASFRQSMAISVIGGLLTSTALSLLVVPVAFTYVEGFERWIMRLHKRFVFWRK
FKAYQATG
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggcgacgtggtcgattcgaaatccgatccccgcgatcatgctgttcgcggtc
ttggcacttgccgggttctggggcttcaaggtgttgccaatccagagctttccggatctg
gacctgcccgtcgtcaatgtcaccttgattcagccaggggcggcgccttcccaactcgag
acggaggttgcgcgcaaagtcgaagactcgcttgcgacgctcggcggcctcaagcatctg
cgaacgtcgatcacggacggccaggtcgccatccgggtcgagttcgtgctcgagaagaat
ctgtcggaagccttgatcgagaccaaagacgcagtcgaccgtgtacgttcggaactgccc
ttggacgttcagccaccaactgtcagcgcgcagcgggcgggtagcaacgccctgctcgtc
tatgccatatcgtccacgcgcttcgacgaagaggccctgtcgtggttcgtcgatgatacc
atcgcaaagataatcctcggcgtgcccggcataggtcgctttgagcgtgtcggcggcgtg
cagcgggaggtgcgcgttgaggttgatcccgtgcctctggccgcacttgggctcacagca
gccgatgtctcgcgcgcactacgccaggttcagcagcaatcctcgggcggacgggcccag
ttaggtcagaacgagcaggccgtccgcacgacggccatcgtgcgccaggcctcagatctt
gccgcgcttccgatcacgctcgcgggcgcacccaaggtgcgcctcgatcaggttgcagat
gttcaagacaccatcgctgatcgcacgcaagtcgctttgctgaacggcgaacccgtcgtc
ggattcaggatatttcgagccaaaggcttcgatgaggcgagcatcgccgacgcggttcgg
aaggcgatggagcaactacagtcgaccgatccaacgctgcatatcaagcagatctcgggc
tcgatcgactatacgcgcgagcagtatgcgggctcgatgcatatgctctacgagggcgcg
ctgctggcgatccttgtcgtctggtggtttctgcgcgactggcgcgcgacgcttatcgcc
ggcgcggcccttccgctatcaatccttcccgccttcgccgcaatggcatggctggggtac
tcgctcaataccgtgacgctgctcgcgctcgcggtcatcgtcgggatccttgtcgatgac
gcgatcgtcgagatcgagaatatcgagcgccatcgcgcaatgggcaagccgatgcgtgag
gcggcaagcgaagccgtaaccgaaatcgggctcgcggttgtcgcaacgacgatgacgttg
gtcgtcgtgttcctgcccacagccttgatgagcggcatttctggaatgctcttcaagcaa
tttgggtggacggcggtcatcgcggtgctggcatccctgctcgtcgcgcgtttgctcacg
ccgatgatggctgcgtatctgctcaagtcacgaccgtcgacggagcacaaggacggtcca
ctcatgacaacatatctccgggccgtcagctggtgcctgggccatcggaagactacggcg
gcggggacgatattgttcttcgtcgcttcgctcgcgcttataccgttgatccccaccgga
ttgatccctccggcggaccgcggttctacgacggtgaatatcgagcttcctcccggaagc
tcgatacagaacacgctgagagttgccgaagatgtgcgcgccgcgctgaaggacgtgcct
gggatcgacaatgtgttcacgacggtcggcgactcccaacaactggggccgggagcgcag
caagctggcgaggtgcgtagaggcgccatggtccttatgctggccccccgcggccaacgt
gaaggtcaggtcgcgatcgagaacctcgtgcgccccaggcttctcgccatccccggcgcg
cggttcgcgatcggcagtggcggcctcggcgagaagatccaattcattctctcaagcgac
aacgtggaggcgctcagagccagcgcggaggcgctcgaacaggaactgcgaggcgtcggc
gggttcaccaatatcaagtctacagccagcctcgaacgtcccgaggtcattgtccgtccc
gatctgctgcgggcggccgatcgcggtgtcagcaccgcctcgattggtgatgtggtccga
atagcaacgagtggcgacttcaacacgcaggtcgcacgtcttaatcttgatagccggcag
gtctacatccgggtgcgtgtcgcggacgcggcgcggcagaagatcgatacgcttgtgaac
atgcgtgtgaatggtcggaacggtccagttccattgtcgagcgttgctgcgatctcggtt
gaaagcggcccctcacaaatcgaccgttatgatcgccgtcgctacgtaaccgttgaggcc
gatctcggcggcatggcgctcggaaccgcgcaagctagagccatggctctgcccgcgatc
cagaacctaccgtcggctgtaaatctcatccgaaccggcgattccgagcttgctggcgaa
cttgcggctggtttcggtatggctatcgtcatcggcattgtttccatgttttgcgtgctt
gtgctgctgttcaaggattttctccaacccgtgaccattctctcggcgcttccgctttcc
gtcggcggcgctttcgtcgcgctgctcatcgcgcgcagtcaactcaatcttccggtcatg
atcggatttgtgatgctgatgggtatcgtggcgaagaattccattctgctggtcgaatac
gcggtcgtcggtatccgcgaacgcggcctttcgatgcatgaagcgctggttgacgcgtgt
cacaagcgcgcgcgccctgttgtcatgaccacgatcgcgatgatcgcaggcatgctgccg
atcgcactgggatttggtgccgacgcgagcttccgtcagtcgatggcgataagcgttatc
ggcggcctgctgacatcgacagcgctctctctgttggtcgtgcccgtggcattcacctac
gtcgaaggattcgaaaggtggatcatgcgtctccataaacgcttcgtcttttggcgaaaa
ttcaaagcgtaccaagcaacaggttag
DBGET
integrated database retrieval system
