Bifidobacterium indicum: BINDI_0417
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Entry
BINDI_0417 CDS
T03564
Name
(GenBank) UDP-N-acetylmuramyl tripeptide synthase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bii
Bifidobacterium indicum
Pathway
bii00300
Lysine biosynthesis
bii00550
Peptidoglycan biosynthesis
bii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BINDI_0417
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BINDI_0417
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bii01011
]
BINDI_0417
Enzymes [BR:
bii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BINDI_0417
Peptidoglycan biosynthesis and degradation proteins [BR:
bii01011
]
Precursor biosynthesis
Amino acid ligase
BINDI_0417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AIC91698
UniProt:
A0A087VTP3
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Position
complement(613665..615269)
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AA seq
534 aa
AA seq
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MALTMTSALDLLGRHHLLREVIQGGDWSLDAPNQDGEPAEFKTLTYDTRQVEQGSLLFCK
GNFKPEYLDGCDQAGMAAYVAETDLSERCQAPGIIVSDVRKAMSLLAAAHYGYPQDDLTL
VGITGTKGKTTTAYFLQSMLNQLSGGRAALLSSVDNCLDGQHYRESELTTPESLDLFRMM
RQAVDAGMRYMVMEVSSQAYKVDRVYGLTFDLGAFLNVSPDHISPIEHPTFEDYLFCKRQ
LTYNSRKLVLGADCAHADLIRQDAAAAGTPLTTFGMDRTEAGSRPRQDADFLVRLGERHE
DGPADSYLIGPASGPMTAINPSMDGDFNALNACAALAMVQALGLKPDQEALKAMEEVRIA
GRMEHFASGNRVAYVDYAHNQASVKALLDFVDEQFGNRNPAVTLVSGSAGDKAIDRRQGI
VQAAQNRVDRLIITGDDEGTEGADRICRQMLGYVTNPDLDVSIILDRTQAITTAIQEGAG
DGTGFQVILVIGKGEERWIKVGHQQIPYEGDDRIVARLLGTRSHDLGATGTPRG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctctgacgatgacttccgcactggatctgctgggcaggcaccacctgctccgcgag
gtgattcagggcggggactggtccctggatgctccgaaccaggacggcgagcctgccgag
ttcaagacgctgacctacgacacccgccaggtggaacagggcagtctcctcttctgcaag
gggaatttcaagcccgaatacctggacggatgcgaccaggccgggatggctgcctatgtg
gccgagactgacctgtccgaacggtgccaggccccgggcatcatcgtttccgacgtgcgc
aaggccatgagcctcctggctgcggcccactacggatacccgcaggatgacctcaccctg
gtcggcatcaccggaaccaaggggaagacgaccaccgcctacttcctccagagtatgctc
aaccagctttcgggcggacgggcggccctcctttcatccgtcgacaactgcctggacggg
cagcactaccgggagtccgaactgacgaccccggagtccctggacctcttccggatgatg
cggcaggccgtggatgccggcatgcgctacatggtcatggaggtctcctcccaggcctac
aaggtggacagggtctatgggttgaccttcgacctgggcgcattcctcaacgtctcccct
gaccacatcagccccattgagcatcccaccttcgaagactacctgttctgcaagcgtcag
ctcacctacaactccaggaaactggtcctgggggccgactgcgcccatgccgacctgatc
aggcaggatgcggcagccgcaggcacaccgttgaccaccttcggcatggacagaaccgag
gcgggatcccggccgcgacaggatgcggatttcctggtccggctcggggaacgtcacgag
gatggcccggcggactcctatttgattggaccggcctcgggtcccatgactgcgatcaat
ccgtccatggacggggacttcaatgccctgaatgcgtgtgccgccttggccatggttcag
gctctcggcctgaaacccgaccaggaggccctgaaggccatggaggaagtcagaatcgcc
ggaaggatggaacactttgcctccggcaatcgggtggcttatgtggattacgcccataac
caggcttcggtcaaggccctcctggacttcgtggatgagcagttcggcaaccgcaacccg
gctgtcaccctggtctccggctcagcgggcgacaaggccatcgaccgccgccagggaatc
gtccaggccgcccagaacagggtggatcggctcatcatcaccggcgacgatgaaggcacg
gaaggagccgaccgcatctgccggcaaatgctgggctatgtgaccaatcccgatctggac
gtctcgatcatcctcgacaggacccaggccatcaccacggccatccaggagggggcgggc
gacggcaccgggttccaggtcatcctggtcatcggcaagggcgaggagcgctggatcaag
gttggtcaccagcagatcccctacgagggcgatgaccggatcgtggcacgcctcctggga
acccgcagccatgatctgggtgccacaggcacaccccggggatga
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