KEGG   Bombus impatiens (common eastern bumble bee): 100742499
Entry
100742499         CDS       T04362                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
bim  Bombus impatiens (common eastern bumble bee)
Pathway
bim03018  RNA degradation
bim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100742499
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100742499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bim03019]
    100742499
   03041 Spliceosome [BR:bim03041]
    100742499
Messenger RNA biogenesis [BR:bim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100742499
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100742499
Spliceosome [BR:bim03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100742499
 Complex C
  U2 snRNP components
    100742499
SSDB
Motif
Pfam: LSM DUF150_C vATP-synt_E TIG_SUH
Other DBs
NCBI-GeneID: 100742499
NCBI-ProteinID: XP_003486164
UniProt: A0A6P3DLZ2
LinkDB
Position
Unknown
AA seq 103 aa
MADETEQVPAINVKEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEETV
TTVEIDEETYEEVYRTTKRNISMLFVRGDGVILVSPPSMRAPI
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctgacgagacagagcaggtaccagcaataaacgttaaagaacccctagatcttata
agattgagtctggatgagagaatatatgttaaaatgagaaatgagagagaattacgagga
cggttacatgcttatgatcagcatttaaatatggtattgggtgaagcggaagagactgta
actacagtagagattgatgaggaaacttacgaagaagtatatcgtacaactaaaagaaat
atctctatgctttttgttcgtggggatggagtaattttggtttcaccaccaagcatgaga
gcaccgatataa

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