Bombus impatiens (common eastern bumble bee): 100748159
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Entry
100748159 CDS
T04362
Name
(RefSeq) cadherin-99C isoform X1
KO
K16500
protocadherin-15
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100748159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bim03037
]
100748159
04515 Cell adhesion molecules [BR:
bim04515
]
100748159
Cilium and associated proteins [BR:
bim03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100748159
Cell adhesion molecules [BR:
bim04515
]
Cadherins
Protocadherins
100748159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_CLSTN
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_BT4661_3rd
CDH23_a-b
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
100748159
NCBI-ProteinID:
XP_012237205
UniProt:
A0A6P3UMF7
LinkDB
All DBs
Position
Unknown
AA seq
1581 aa
AA seq
DB search
MARTTTAWFCCLLCVFLCLRNVTSKAGLCEVESGQSNIILDIEESRGDATDQKTVPEELP
VSGDPYNETTLELIFPGRQPRFKLNGKKLQLLDPLDRDDENLSHVVFQLSCTVKQTNKKR
TIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADAGVNGIVEYSIAP
GDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQRYLVTILASDRA
RNVSERFTSTTTLTVNIRDDDDQDPSFIYQGCMLLDGACINPEYSASVSSGVLSGILNIS
PEKIQAVDMDSINAPIHYSFLSGNPSNYREFFEINPNTGAVKQIKAVDTTVTKKFDIIIK
AVEVSEAKRSATAKLTITVKPVDSNPPIITASNIEGFVDENAPIGTKVIDKIGNPVVLTV
SDADLGPEDPKPAYTFELTTNFFAIDPSGILVVNEENLDRDPPSPGRFRFQVVAREKTGV
AASAPLSFVVILNDVNDNAPMLPMIAPITVQAGETKKVVTKVEATDNDEGENAEITYSIY
HVSNNGLHKFKIDPKTGLIESVRKLNAGEQFSITVQATDKGGKYSQTIVEVNVIPGPNTR
SPVFQQPVYEVQVSEGASINSTVATITAVDPENDPVSYSIVSGNDLRQFAIGDKSGVITV
IRKLDREDLTRYQLLIKAEDSGGLFNTATVNIKVTDINDKNPEFVDLPYEFTVKEGEARK
LIGRVHAEDADEGINAEITYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEYKFVVTARDG
APDYRLATATVTVKVIDVEDEVPVFHQSSYEARVKENIPDYTVLQVTADDPDTKKQITYM
IKQGNTELFGIDPKTGVIKTVRGLDYERENQHILIIGTVENTSDSPGSTTRVVVNVQDVN
DIPPVFTSVPRPITLDDDVPIGTTVINLVATDSDGTAPGNQVRYEIVGREIANKYFVIDP
DTGVLRIRDDLRKETNTEYQVDVRAYDMGEPQLASVTTVPVYVRHVATVPPEIGLGFAEN
SYNVEVPEDAGDNTLIKIITVINSHAHDTTPLKCEIYSGNEKELFEANVTEERNCALRLR
KGVLDYETTESYQVKLKLESLSGLLNTDRNTTMVKIQVLDVNDNKPEFIFADSRAKLSRG
RYFAAIPRTAQFASTVIQVKAHDKDNGKYGKLEYKILGGRGSDYFAMDSSSGIIRTTATF
DNVDLSELPFKFDVRVRDNPNSTDNFNSIVAPVIVNLIEEENLMILVVQDAPPDALQKEA
SKIAGIIEEKSGLLIGIDRVAVRKNLTKNGTVEMYPQDSDVWFYAIDPDTEAILDRNSSR
IQRSIIEKTAMSNITFDVSTLVRANAIDIHAPVMPAESVRTQTAIAFSGEVFPYALIIIA
CVILILGIAGIIYICVSWSRYKAYKERMQRMYVVPRYDPVYVEPNLKEYETQVLQMSVPV
DDNDSYNDLQLDFSNKNHAFSLDNVSYITKDHGESTGQQSPVSSEAATTARASSIVGTHG
ETNIHSLRRSTLGRKNPNSNANTLNNHDTTPVLNPLYNHGNDLLSPSPSNDNVTFREKRD
YSHLGFTYLGEQSPVETTTEL
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggacaacgactgcgtggttttgctgcttactctgcgtgtttttatgccttcgt
aacgtcacttcgaaagctggcttgtgcgaggtggagtcaggacaatcgaatattattctt
gacatcgaggagagcaggggagatgcgaccgatcagaagaccgtgccggaggaacttccg
gtatctggcgatccgtataacgagaccacgctggagttgatctttcctggaagacagcct
cgttttaaattgaatggaaagaagctgcagctgttggatcctctggatagggacgatgaa
aatctctcgcacgtcgtttttcagttgagctgtacggtgaagcaaacgaacaagaaacgg
accataccggtgattgtgcgagtgtcagatataaatgataatgcgccaaaattcattaac
acgccatacgagacaacggtgccagagttaacgccagtcggttcgaccatcttcaaaaac
gttgtggccgtggacgcggatgccggtgtgaacggcatcgtggaatactcgatcgctcct
ggtgacggaactggcattggcaacaatgacggagttggtcgaaatagaataacaacggcc
gatggatacggttatttcagcattaacttacctcatcaaggccaagttactgttaaccgt
accctggattttgaaagaacgcaacgatacctcgtcaccattttggcatcggatcgcgca
aggaacgtatccgaaaggttcacatctaccaccaccttgacggtaaatatcagagacgac
gatgatcaagatccttccttcatctatcaaggttgtatgctgttggatggcgcctgcatt
aatccagaatattcggcgtccgtatcgagtggagtgttatccgggatacttaatatatcg
ccggagaaaatacaagcggttgatatggacagtataaacgcacccattcattactcgttt
ctcagtggcaatccatcgaattatcgagaatttttcgaaataaacccgaacactggcgcc
gtgaagcaaatcaaggcggtcgacacaacggttaccaagaagttcgatattatcatcaag
gccgtcgaggtgtcggaagcgaaacgatcggccacagcgaaattgaccatcactgtgaag
ccagtcgacagtaaccccccgattataacagcatcgaacatagagggtttcgtcgatgag
aatgccccgattggaacaaaggttatcgacaaaataggcaatcccgtggtactcactgtt
tcggacgctgatttgggccccgaagatccgaaaccagcttacactttcgaattaaccacc
aatttcttcgcgatcgatccttccggtatactcgtcgtgaacgaagagaatctggatcgt
gatcctccgagtcctggtcgtttccggtttcaagtggtggccagggaaaagacgggcgtt
gctgcttctgcgccattatccttcgtggtgatattgaacgacgttaatgacaacgcacct
atgcttcctatgatagctcccatcaccgttcaggctggagaaacgaagaaagtagtgaca
aaggtcgaggcaacggacaacgacgaaggggagaatgccgaaataacatacagcatctat
cacgtgtcaaataatggactacataaatttaaaatcgatccgaagaccggcctgatcgaa
tccgtgagaaagctgaacgcaggcgaacaattcagcattaccgtacaagctactgacaag
ggtggaaaatattcacagacgatcgtcgaggtaaacgtgattcctggacccaataccagg
agtcccgtcttccagcaaccggtatacgaggtgcaagtcagcgagggagcgtccattaat
tccacggtcgccacgattaccgcagttgacccggagaacgatccagtgtcgtactcgatc
gtatctggaaacgatctgcgtcaatttgcgatcggtgacaaatcaggcgtgatcactgtt
ataaggaagttagacagggaggatctgacccgttatcagctgctgataaaggccgaagat
tctggcggtttgttcaacacggcaacggtaaacatcaaagtaacagacatcaacgacaag
aatccagaattcgtcgacttgccttacgagtttactgtgaaagaaggagaagctaggaaa
ttaataggtcgggtgcatgccgaggacgccgatgaaggcatcaacgcagaaatcacgtat
ttcgcgccagacgacataccgtttaccgtcgatcctgaaactggagatgtgttgacgaaa
atcgttttggactatgagcaaaatgacgaatacaaatttgtggtaaccgcgagagacggt
gctcctgattaccgcttagctactgctacggttacagtgaaagttatagacgtcgaggac
gaagttcctgttttccatcaaagcagctacgaggctcgagttaaagagaatataccagat
tacacggtgcttcaagtaacggctgatgatccggacacaaagaagcagatcacgtacatg
attaaacaaggcaacaccgaactattcggcatagacccgaagactggagtcataaaaacc
gttcgcggtttggactatgagagggagaaccagcatatccttataattggcaccgtcgaa
aataccagcgattcgcctggttctactactagagttgtggtcaatgttcaggacgttaac
gacattccaccagtgttcacgtcagttcctcgtccgattacgctggatgacgacgttccc
attggcacgacggtcattaatctcgtagcaacagattccgatggcactgctcctggaaat
caagtgagatacgaaattgtcggccgtgaaatagcgaacaaatattttgtgatcgatccg
gacactggcgtgcttaggatacgagacgacttgcgtaaggaaacgaacactgaatatcag
gttgatgttcgcgcgtacgacatgggagaaccgcaactggcgtccgtcacgacagtgcca
gtttatgttcgtcacgtggccacggtgccgccagaaatcggcttaggttttgcagaaaat
tcctacaacgtcgaagtaccggaagatgcgggcgacaatacgttgatcaagataatcacg
gtcattaatagtcacgcacacgatactacgccattaaaatgcgaaatttatagcggtaac
gagaaggaattgttcgaagcgaatgttacggaggaacggaattgcgcgcttagactccgg
aaaggagtgttggattacgaaacaacggaatcctatcaagtgaaactcaagttggaatct
ttatcaggtctattgaataccgacaggaatacaacgatggtcaagattcaagtgctcgac
gtaaacgacaataaaccggagttcattttcgcggacagtagagcaaaactatcgagagga
cgttactttgctgcgattccccgaaccgcccagttcgcgtcgacggttatacaagtgaaa
gcacacgataaggataacggcaagtacggcaagctcgagtacaaaatacttggtggacga
ggatcggactacttcgccatggacagttcttccggaataataagaaccaccgcgactttc
gataacgtggatctgtccgagcttccattcaaattcgacgttcgagttcgagataatcct
aattcgactgacaactttaactcgatcgtagctccggttatagtgaatctgatcgaagag
gagaatctaatgattctagtagttcaggacgcgccaccagacgcgttgcaaaaggaggca
tccaagatcgctggtatcatcgaggagaagagcggtcttttgatcggcatcgatagagtg
gcagtgagaaaaaatttgacgaaaaatggaaccgtcgagatgtaccctcaggattccgac
gtgtggttctacgccatcgatccagatacagaagctattttagataggaacagttcgcgt
atacaaagatcgattatcgaaaaaacggctatgtcaaatatcaccttcgacgtgtcgacg
ctggtccgagcgaatgcgatagacattcacgcgccagtaatgccagccgagtcggtacgc
acgcaaaccgccatcgctttcagcggcgaggtatttccgtatgccttgataatcatcgcg
tgtgtcatcttgatcctaggcatagctggtatcatctacatttgcgtgtcctggtccaga
tacaaagcgtacaaggaacgaatgcagcggatgtacgtcgtgccccgttacgatcctgtg
tacgtcgagccaaatttgaaagaatacgagacacaggtgcttcaaatgagcgtgcctgtc
gacgacaacgacagctataacgatctgcagcttgatttcagcaataagaatcatgcgttc
agcttggacaatgttagctatattaccaaagatcacggagaaagtaccggtcaacagagc
cctgtaagttccgaagcggcgaccacggcacgtgcttccagcatagtcggtacccacgga
gagacgaacattcactcgttgcgacgatcgacccttggtagaaaaaatcctaacagcaac
gcgaacacgttgaacaaccacgacacgacgcctgtcttaaatccgctctacaatcacggt
aacgatctactcagtcctagtccgtcgaacgacaacgtcacgttcagagaaaagagggat
tattctcatctagggttcacgtatttgggtgaacaaagcccggtggaaacgaccacggag
ttgtaa
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integrated database retrieval system
