Bombus impatiens (common eastern bumble bee): 100748862
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Entry
100748862 CDS
T04362
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100748862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bim03041
]
100748862
Spliceosome [BR:
bim03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100748862
Complex C
U5 SnRNP specific factors
100748862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
100748862
NCBI-ProteinID:
XP_003494426
UniProt:
A0A6P3E364
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASDSEDENEYGNAGDDAEDRERSDEEMEEDRDEVREQSEQGNS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKPKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVRQTHPYLHSVTDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTPGHVNFSDEATAAIRLSDGAVLIVDAAE
GVMLNTERLLKHALQEKLALTVCINKIDRLILELKLPPLDAYYKLRHIIEEINGLIALYS
DSENPSFVSPAIGNVCFASSEYNVCFTLKSFAALYAKIHPSLNANEFSKRLWGDIYFNSK
TRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMNI
RPLLRLVCTRFLGDMCGLVDMCVAHVPSPQSHAPVKVQHVYTGSMDSSLAQDMINCDPDG
RLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLWI
SEARYSIELNRVPAGNWVLIEGIDRPIVKTSTITDLSNSDDLHIFRPLKFNTQSVIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVKITWNKK
RLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLNSARDAIIQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYL
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatctatacgatgaatttggcaattatattggtcccgatttggcttctgat
agcgaagatgaaaatgaatatggaaatgctggagacgatgcagaagacagagaacgctcc
gatgaggaaatggaagaagacagagatgaagttagagagcaatcggagcaaggaaattcc
atggcagttgtattgcacgaagataaaagatattatccaagtgctttagaagtttatggg
ccagaggtagagacattggtacaagaagaagatgcacaaccattagataaaccactgata
gcaccaacacgaaaaccaaagtttcaaataaaacaacagcaactaccagagacaacgtat
agcatagaatttttagcagatatgatggatgcgcctcaccttatacgtaatgttgttcta
cttggtcatctacatcacggcaaaactactttagtcgattgtctagtgagacagacccac
ccctatcttcacagcgtaacagacgaaaaacctttaaggtataccgacacattattcacc
gagcaacagcgaggggtatcaacgaaagcaacacccgtgacgttgttactgcaagacgta
aaatcaaagtcctaccttttgaatatattcgatactccgggtcacgtaaatttttctgac
gaggcgacagcggcgatacgtttatccgatggagcggtgctgatcgtcgacgccgccgaa
ggcgtcatgttgaacacagaacgtttactaaaacacgcgcttcaggaaaaacttgcgtta
acagtttgtataaataagatagaccgactgatcctcgaattaaaattgccccccttagac
gcgtactataaattaagacatatcatcgaagaaattaatggactgatagcgctatattcg
gattctgaaaatccatctttcgtgtcacctgctatcggaaacgtgtgctttgcgagctcg
gagtacaacgtctgtttcaccctgaaatctttcgcggcgctttacgctaagatccatccc
tcgcttaacgccaatgaattttcgaaacgactatggggagatatatactttaattcgaaa
acacggaaatttacgaaaaaaccgccacacaataccgcacagcgcagctttatcgaattc
attctcgagccattgtacaagatcttcgcgcaagttgtcggtgatgttgacacaacttta
cccgatgtgctggacgaattaggcataagactaacatcagaagaaatgaaaatgaatatt
agacctctgttgagattggtatgcacgcgtttcttgggagacatgtgcggattagtcgat
atgtgtgtagcccacgttcctagtcctcagtcacacgcaccagtcaaagttcaacacgtg
tacacaggttctatggattcgtctctcgcgcaggatatgatcaattgcgatcctgacggc
aggctaatgattcacagtacaaaaatgtatcctaccgaggactgtactctattcgtggtc
ctcggaagggtaatgtcaggtacactcgaggcaggacaacgtgtccgcgtattaggtgaa
gcatactcgcgtaccgacgaagaagattctcgcgttctaaccgtgggaaggttatggatc
agcgaggcacgctactcgatcgagctgaacagagttcccgcgggcaactgggtacttatc
gaaggtatagacaggccgatcgtaaaaacgagcaccattaccgatctcagtaattcagac
gacttacatatcttccgaccattgaagttcaatactcagagcgtgatcaaaatcgcggtc
gaacctgtcaatccatcagagttaccaaagatgttagacggcctgaggaaagtgaataaa
agttacccattgctgggcacgcgagtcgaggaaagcggcgaacacgtggtcctaggtacc
ggtgaactgtacttggactgcgcgatgcacgacctgcgtcgtatgtattcggaaatcgat
ataaaagtagcagacccggtcgttgctttcgcggagacggtagtagaaacgagttctctc
aagtgtttcgccgagacacccaataaacggaacaagttgacgatgatcgccgaaccactc
gagagaggcctggctgaagacatcgaggcagaacatgttaaaatcacgtggaacaaaaaa
cgtctaggagaatttttccagacgaagtacgactgggatttattggcggcgcgaagcata
tgggcgtttggtccagacgccacgggtcctaatattctggtcgacgacactttgccatca
gaagtagacaagacgctattgaacagcgcccgtgacgccatcattcagggtttccagtgg
ggtacgcgagaaggtcctctctgcgaagaaccgattagaaacgtaaagttcaaaatcctg
gacgccgtgattgctcaagaacctcttcatcgaggaggtggtcagataattccgacggcc
agaagggtagcctattctgccttccttatggcaacgcccagattgatggaaccctacttg
ttcgtcgaagttcaagcgcctgcggattgcgtgtcagcagtttataccgtactggctaaa
agaaggggccacgtgactcaagacgctcctgttcccggaagtcccttgtataccatcaaa
gcattcattccggcaatcgatagtttcggattcgagactgacctgcgaacccatacgcaa
ggtcaggcgttctgcctgtccgtattccatcattggcagatcgtacctggcgatccatta
gataaaagcatcactattcgaccactggagccacagccagctacgcacttagctagagag
tttatgttgaagacaaggaggcgaaagggactttcggaagacgtgtctatcaacaaattc
ttcgacgatcctatgttactggaattagcccgacaggacgttctattgaattacccgtta
taa
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