Bombus impatiens (common eastern bumble bee): 100748889
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Entry
100748889 CDS
T04362
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bim04131
]
100748889
Membrane trafficking [BR:
bim04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100748889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
dsrm_Ferlin
FerB
FerI
Motif
Other DBs
NCBI-GeneID:
100748889
NCBI-ProteinID:
XP_003491130
UniProt:
A0A6P3E0N5
LinkDB
All DBs
Position
Unknown
AA seq
2060 aa
AA seq
DB search
MALVVIVKNFQGLKFKGDKVVKVDFRGVPHYSKCLEESGDHITVDESFTWNLGRPVDEVE
VLQLSVVSRGVLKNEKVLAKYGLVLQTVIREGRIIVTDSLVDLNNKPLPAVVCFEIRYNP
PDGSCSSYAASEIMEDEQQMLIDIEQNIANLERSLEQANSGSDAAKKKGSWHSPQKSSKR
GFLQRGSSLLTADKSPDRKSRSSTLKSMRSLIKLGKQRPPRARSCDSGSDTSELLDRRDS
SCTTSNEPSRTNSMTSLETNVSDYDSQGGTNTVKTQEAIVKPTKKSKPKTVDTGQTALKA
QDYQVCVTIIEARQLAGLNMDPVVCVQIGDQRKYTSVKESTNCPYYNEYFVFDFHMPPVM
LFDKIITLSVQQSRNLLRANLTLGIFKLDIATVWAQPDHQFYHKWALLTDPDDVAGGPKG
YLKCDISVIGKGDTVKIPPKSEKDEDDIEGNLLLPDGVPIERQRAKFIVKVYRADGLPKM
NSSIMANVKKAFTGEIKDLVDPYVQVSFAGLTGKTSVKRHSYAPVWNEQIVFTEMFPPLC
QRIKIQLCDNDPVHATVIGTHFVDLKKISNDGEKGFLPTFGPAFIHFYGSIRDYSIIDKH
STLNAGLGEGISYRARLLIGIRTEISDNVEMAPSEVEVEPTIPINESVYARNEEFFLFAT
IMDATMVDKKIGDKPMYFELSIGNAGNALDGHNESSKICEMGPKSGTSSDQEELQEVLSG
SWQSTTPACKPMTHDKMYYFLPYWDDKPCLHVRSIWPDYRRRMYNSNIISKISDKLEEGL
SEAQSHADDCTGEKILKSALDELSSNCNRYVSISKSSITGPGVGKTKLDKERTKLCQREL
ESIGIMSRNLKAVVTKSSFKERLKTAQSYLQKLKFLVEDPQDSLPDVFIWVISSGRRVAY
HRILGRDLIYSIVDEECGRYCGKVQTMFLKLPGKKRFGPSGWAIQTKLQIYMWLGILKHK
KYFIQGLPKGYELSHELRNVDRPRALPPTVIHYVEKHKFQLRAHMYQARSLIGSDASGLS
DPFARVICGEFSNSTQVIDETLSPTWDELLLFDDILIYGTDEEIKKDPPSIVVELFDQDK
VGKSEYIGRAVARPHVKLASESYTPPKFPPSLEWYDVTRGAARAGELLAVFELLEYPQTK
DYSFPTLPDPKEIPSQTPVAAQDRGPILPVPVGIRPTLSKYRIEVLFWGLRDLKRIHLMT
VDKPRVDVECAGHILYSSVITNAKKNPNFNTPVKFLELELPEQELYRPPLTIRAVDCRSF
GRYTLVGTHTINSIHKYMYHPQTKKAKDVEERKKNLYQLQQYTGFDTSKIKMQYPSLPES
LTDLEFGIGDAIITLGLEQGWPTKKDKTEQNIKKKQSLINDGSMGDFYTLENEDGCQDWW
TKYFASVEAMIEENKELRREKPMFQTQANGTVPAYMEENYNQNQANPSNEKSPGVAAKRL
FGLKSTANAARFVSKLSPKHTYRNFPKTALLKIYPNELEAQPEFEQFKEWLHTFELYRGK
KTGDEPEDESRIVGSFKGALKVYKWPLPRDLIDHTVMGFDPQYGFFQGVPSNEPIHVLVR
VYIVKANDLHPCDLNGKADPYVVLQLGGKRISDKENYVSKQLNPVFGKCFEIEATFPQDS
LLTVQVLDWDLVGTDDMIGETKIDLENRFYSRHRATCGLAKKYDESGYNKWRDAMKPTQI
LSKLCKEGKIDGPAYSHGKVTIGRKTFSLSDEEMECYVHTKGIEEHLALAVLHQWHAFPR
IGCALVPEHVETRPLYNPEKPGIEQGKLEMWVDMFPMDMPSPGPSIDISPRKPKSYELRI
IVWNTDDVILEDDAFFTGEKMSDIYVKGWLKGPEDCQSTDIHYRSLTGEGNFNWRFIFPF
DYLVAEEKIVINRKESLFSWDETECKIPARLELQVWDADHFSADDFLGAITLDLNRFPRG
AKNSKLCTLSMLKTDGSVPTVNIFKQKRIKGWWPFYVKKENEDMELTGKVEAEIHLLTKE
EAEKNPAGFGRNEPDPLDKPNRPDASFMWFLNPLKSVKYIVWHNYKWAILKAIVAIALII
VVLLFFYSIPGYSVKKLLGA
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtcgttatcgtcaagaattttcaaggactgaaattcaaaggagacaaggtt
gtcaaggtcgacttccggggtgtccctcattactcaaaatgcctcgaagaaagcggagac
catattacggtagatgagagcttcacttggaacttgggaagaccggtggatgaagtagaa
gtactgcaattgtcagtggtatcgcggggcgttttgaaaaatgaaaaagtgctcgcgaaa
tacggtttggttttgcagacggtgatacgagaaggtcgaatcattgtcacggattccttg
gtagacctcaataacaagccgcttccggctgtcgtctgctttgaaattcgatacaaccct
cctgacggaagttgcagctcgtacgcggcctcggaaataatggaggatgaacaacaaatg
ttgatcgacatcgagcaaaacatcgcgaaccttgaaagaagcctcgagcaagctaacagc
ggcagcgatgccgccaaaaaaaagggttcttggcatagtcctcaaaaaagttcgaaacgg
gggtttctacaaaggggtagttcgctgctaacggctgacaagtcaccggatcgcaagagt
aggagttcgacgttgaaaagcatgagatctcttataaagttggggaagcaaagaccaccc
agagctcgatcctgcgacagcggctcggataccagcgaattactcgatagaagggattcg
agttgcaccacatccaacgaaccttcgagaacgaattcgatgacttctttggaaacgaac
gtgtccgattatgacagccagggtggaacgaatacggtgaaaactcaggaggcgatcgtg
aaaccaacgaagaaatcaaagccaaagaccgtcgacactggacaaaccgcgttaaaggca
caggactatcaagtttgcgtcaccatcatcgaagcgagacagttggccggtctgaacatg
gatccggtcgtttgcgtacaaatcggagaccaacgaaaatacaccagcgtcaaagaatct
acgaattgtccgtattacaacgagtattttgtcttcgatttccacatgcctcctgtcatg
ctgttcgataaaattatcacgctatcggtgcagcaatcgcggaatctcttacgcgctaat
ctaacactgggcatctttaagttagacatcgcgactgtatgggcacaaccagatcatcaa
ttttaccataaatgggcactgttgacggatccggacgacgtggctggtggccccaagggt
tacttgaagtgcgacataagcgtgatcgggaaaggcgacaccgtgaaaattcctccaaaa
agcgagaaggacgaggacgatatcgagggtaatcttttgctaccggacggtgtgcctatc
gagagacaaagagccaagttcatcgtgaaggtgtacagagcggacgggctaccgaagatg
aacagcagcatcatggcgaacgtgaagaaggcgtttaccggtgaaatcaaggatctcgtc
gatccgtacgttcaagtgtccttcgccggactaaccggtaagacgagcgttaaaaggcac
agttacgcgccagtttggaacgaacagatcgtcttcacggaaatgtttccacctctctgt
caaaggattaaaattcagctatgcgacaacgacccggttcacgcgaccgtcatcggcacg
catttcgtcgacttgaagaagatcagcaacgacggtgaaaagggatttctaccaactttt
ggaccagcttttatccatttttacggaagcatcagggattacagtatcatagataagcat
tccacgttgaacgctggattgggtgaaggaatctcttacagagcaagattattaataggc
attaggacagagataagcgataacgtggaaatggctccatcggaggtggaagtcgaaccc
acgatacccatcaacgaatccgtttatgccaggaacgaagaattttttcttttcgccacc
ataatggacgccacgatggtcgacaagaaaattggcgacaaaccaatgtatttcgaatta
tcgatagggaatgcgggaaacgctttagacggtcacaacgaaagctccaagatatgcgaa
atgggaccaaaaagtggaacgagtagcgatcaagaggagctgcaggaagtgttgagcgga
tcttggcagagtaccactccagcctgtaaaccgatgacgcacgataaaatgtattatttc
ttgccgtactgggatgacaaaccttgccttcacgttaggagcatctggcccgactatagg
cgtagaatgtacaatagcaatataatcagcaaaatttccgataagctggaggagggattg
tcggaggctcagtcgcacgctgacgactgtacaggcgagaaaatcttaaagtctgcgtta
gacgaattaagcagcaactgtaatcgatacgtcagcatcagtaaatcgagtatcaccggg
ccgggagttgggaagacgaaactcgataaagagaggacgaaactttgtcaaagagaatta
gaaagtattggaattatgtcgcgtaatcttaaagccgtggtcactaagagtagttttaag
gaaagactgaagactgcacagagctatttgcagaaattaaaatttctcgtcgaggaccct
caagattctctaccggatgtttttatttgggtaattagttccggacgtcgagtcgcgtat
cacagaatactcggaagagatttgatatattcgatcgtcgatgaagaatgtggcagatac
tgcggcaaagttcaaaccatgtttctcaaacttccagggaaaaaacgattcggaccttcg
ggttgggcgatacaaacgaaattacaaatctacatgtggctgggtatcttgaagcataaa
aagtactttatccaaggtctgccaaagggttacgaactcagtcacgagttgagaaacgtg
gacaggccgcgcgccttaccacccaccgttattcattacgtcgaaaaacacaagttccag
ttaagagcacacatgtatcaagcccggtctctgatcggcagcgatgcgtcaggtctttcc
gatcccttcgccagagtaatttgcggcgaattttccaactctactcaagtgatcgacgaa
actttgagtcctacgtgggacgaactccttcttttcgacgacatattgatttacggaacc
gacgaagaaattaagaaggatccaccgtcgatcgtcgtcgagctcttcgatcaagacaaa
gtggggaaatcggaatacataggtcgagcggtcgcgcgacctcacgtgaaactcgcctcg
gaatcttacacgccacccaaattcccaccttcgttagaatggtacgacgtaacgagaggc
gctgcaagagcgggcgaacttctcgccgttttcgagctactcgaatatccgcagacgaaa
gattacagctttcccactttaccagacccgaaggaaataccgagccaaactcccgtcgca
gctcaggatcggggaccgattcttccggttcccgttggaattcgaccgactctctccaag
taccgaatcgaggtactgttttggggtctaagggatttgaagaggatccatctaatgact
gtggacaagcctcgagtagacgtcgaatgcgccggtcatattctttactcttcggttatc
acaaacgcaaagaaaaatccgaatttcaatacaccggtgaaatttttggagttggagttg
cccgaacaggagctctatcggccacctttgaccatcagggctgtagattgcagaagtttc
ggtcgttacactctcgttggaacgcacacgataaattcgatccataagtatatgtaccat
ccgcaaacgaagaaagcgaaggatgtggaagaaagaaagaagaatctgtatcaattacag
caatacacgggtttcgatacatcgaagattaaaatgcaatacccgtctttgccagagtct
ttgaccgatctcgagtttggtatcggagatgcgattattactctaggtttggaacaaggt
tggccaacgaagaaggacaaaacggaacagaatataaaaaaaaagcaaagtctgatcaac
gacggaagcatgggtgatttctacacgttggagaacgaagatggttgtcaagattggtgg
accaaatacttcgcttccgtcgaagccatgatagaagaaaacaaggaactgcgtagagag
aaaccaatgtttcaaacgcaagcaaacggtaccgttccggcgtacatggaggaaaattac
aatcaaaatcaagcgaatccgtcgaacgagaagagtcctggcgttgcagcgaaaagattg
tttggcctaaagtcgacggcgaacgcagctaggtttgtttcgaaactgagccccaagcac
acctatcggaatttcccgaaaacggcgctgttgaaaatttatccgaacgagttggaagct
cagccagaatttgaacagttcaaggaatggctgcacacgttcgaactttacagaggaaag
aaaacgggggacgagcccgaagacgaatccagaatagtgggaagctttaaaggggcctta
aaagtttacaagtggcctctccctagggatttgatagatcatacggtgatgggattcgat
ccgcaatatggcttttttcaaggtgtaccttccaacgaaccgattcacgtattggtacgt
gtttatatcgtcaaggcgaacgatcttcatccttgcgatctaaacggaaaagcagatcct
tacgtcgttttgcaactaggcggtaaaagaatcagtgacaaagagaattacgtgtcgaaa
caactgaatcccgtattcggcaagtgtttcgaaatagaagcaaccttcccgcaagattcg
ttgttgaccgttcaagtgttggattgggacttggtcggcacggacgatatgatcggtgaa
acaaagatcgatctggaaaatcgattttatagccggcatcgtgccacttgcggtctagcc
aaaaaatacgacgaatccggttacaacaaatggagagacgcgatgaaaccgacgcagatc
ttgtcgaagctttgcaaagagggaaagatcgacggaccggcatattcccacggaaaagta
acgataggaagaaaaacgttttctttgtcggacgaggaaatggaatgttacgttcatacg
aaaggcatagaagaacatcttgcactggcagttcttcaccaatggcatgcttttccaaga
atcggttgtgctctggtccccgagcatgtggaaacacgtccactttacaatcctgaaaaa
cccgggatcgagcaaggaaagttggaaatgtgggttgacatgtttcctatggacatgcct
tcgccaggaccgtcgatcgatatttcaccgaggaaacccaaaagttacgagcttcggatc
atcgtatggaacaccgacgacgttatactggaagacgacgcgttctttactggcgaaaag
atgagcgatatttacgtgaaaggatggctgaaaggccccgaagattgccaatctacggac
attcattatagatcgttaacaggagaagggaatttcaattggcgttttatatttccattc
gattatctcgtagcagaagagaagatcgttatcaatcggaaagaaagtctgtttagctgg
gacgaaactgaatgcaagattcctgctcgtttggaattacaagtctgggatgcagatcac
ttttcagctgacgattttctgggtgctattactctcgatttaaatcgatttccacgaggt
gcaaagaatagcaagctttgtacgttaagtatgctaaagaccgatggatctgtgccaacc
gtaaatattttcaaacagaaacgaataaaaggttggtggcctttctacgtcaaaaaagaa
aacgaggatatggaattaacgggtaaagtagaagctgagattcatttgttaaccaaagaa
gaggctgagaaaaatcctgcaggatttggaaggaacgaacctgatccgcttgacaaaccc
aacaggcccgatgcatctttcatgtggtttttgaatcctttgaaatctgttaaatatata
gtatggcacaactacaaatgggcaattctgaaagctatagtagcaattgcattaataata
gtcgtattattgttcttttactcgatacctggttattccgttaaaaagttattgggagct
taa
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