KEGG   Bos indicus (zebu cattle): 109553017
Entry
109553017         CDS       T04792                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109553017 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:biu03041]
    109553017 (SMNDC1)
Spliceosome [BR:biu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109553017 (SMNDC1)
 Complex B
    109553017 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109553017 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 109553017
NCBI-ProteinID: XP_019808391
UniProt: A0A6P5AVE8
LinkDB
Position
26:complement(31243475..31255386)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDNFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagctggcaagctacaaagctcaactccagcaagttgag
gctgcgctgtctggaaatggagaaaatgaagatttactaaaattaaagaaagatttacaa
gaggttattgaactaaccaaagaccttctgtcaactcagccttctgaaactctggcaagt
tcagacaactttgcttctactcagcccactcattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaggaa
aacggcaccgctgcaatcacttttgctggctatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcacagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgaacaagaaagagaggaccagaaggtaaaatggcaacag
ttcaacaacagagcctattctaaaaacaaaaagggccaggtaaagaggagtatttttgct
tcacccgagagtgtaactggcaaagttggagtaggaacttgtggaattgctgataaacct
atgacacagtatcaagatacctctaaatacaatgttaggcatttgatgcctcaataa

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