KEGG   Bos indicus (zebu cattle): 109553743
Entry
109553743         CDS       T04792                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04060  Cytokine-cytokine receptor interaction
biu04061  Viral protein interaction with cytokine and cytokine receptor
biu04062  Chemokine signaling pathway
biu04064  NF-kappa B signaling pathway
biu04360  Axon guidance
biu04670  Leukocyte transendothelial migration
biu04672  Intestinal immune network for IgA production
biu04810  Regulation of actin cytoskeleton
biu05163  Human cytomegalovirus infection
biu05200  Pathways in cancer
biu05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:biu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    109553743 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109553743 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    109553743 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109553743 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    109553743 (CXCL12)
   04672 Intestinal immune network for IgA production
    109553743 (CXCL12)
   04062 Chemokine signaling pathway
    109553743 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    109553743 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    109553743 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    109553743 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    109553743 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:biu04052]
    109553743 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:biu00536]
    109553743 (CXCL12)
Cytokines and neuropeptides [BR:biu04052]
 Cytokines
  Chemokines
   109553743 (CXCL12)
Glycosaminoglycan binding proteins [BR:biu00536]
 Heparan sulfate / Heparin
  Chemokines
   109553743 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 109553743
NCBI-ProteinID: XP_019809404
UniProt: A0A6P5BIE5
LinkDB
Position
28:45237089..45266323
AA seq 119 aa
MDAKVFVVLALVLTALCLSDAKPVSLSYRCPCRFFESHVAKANVKHLKILNTPNCSLQIV
ARLKNNNRQVCIDPKLKWIQEYLDKALNKGSREEKVGKKEKIGKKKRQKKRKAAQKRKI
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgccaaggtcttcgtcgtgctggccctcgtgctgactgcgctgtgcctcagcgac
gcgaaaccggtcagcctgagctacagatgcccttgccgattctttgagagccatgtcgcc
aaagccaacgtcaagcacctcaaaatcctcaacactccaaactgctcccttcagatcgtg
gcaaggctgaagaacaacaataggcaagtgtgcattgacccgaaattgaagtggattcag
gaatacctggacaaagctttaaacaaggggagcagagaagaaaaagtggggaaaaaagaa
aagataggaaaaaagaagcgacagaagaagagaaaggctgctcagaaaaggaaaatctag

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