Bos indicus (zebu cattle): 109557613
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Entry
109557613 CDS
T04792
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109557613 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109557613 (IRF5)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109557613 (IRF5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109557613
NCBI-ProteinID:
XP_019814616
UniProt:
A0A6P5BCB9
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Position
4:96108368..96121578
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AA seq
580 aa
AA seq
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MINSWRTDASNIWLAFLRSYFGPVNADAQEGRVVRKKEPEALLPLKRLPPDLEKSSLSLR
TGGYAGSVPSVADPGLTDACAMNQPAPAALLPPRRVRLKPWLVAQVNSCQYPGLQWVNGE
KKLFYIPWRHATRHGPSHDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRD
FRLIYDGPRDMPPQPYKVYEVCSNGPAPAESQPSEDNAEEEEEEELQKMLPGLSITEAVQ
PGPAMAPYSLPKEDVKWPPTLQPPVVLAPPAPGPNLLVPAPGNAADFGEVFSEVLPSSQP
QPGSLSTSLAPTGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQ
LEATQEQVELFGPVSLEQVRFPSPEDIPSEKQRFYTNQLLDVLDRGLILQLQGQDLYAIR
LCQCKVFWSGPCASAQGSHPNPIQREVKTKLFSLEDFLNELILFQKGQTNTPPPFEIFFC
FGEEWPDCKPREKKLITVQVVPVAARMLLEMFSGELSWSADSIRLQISNPDLKDRMVEQF
KELHHIWLSQQHLQPVAQTPAMPGLSAAQGPWPMHPVGMQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgataaacagctggaggacggacgcttccaacatctggctggccttccttaggtcctac
tttggtccagtaaatgcagatgcccaggaggggcgagtggtgaggaagaaagaaccggag
gcactcctgcccttgaagaggttgccccctgacctggaaaagtcttctctgagtctcagg
acggggggctatgctggctctgtcccttctgtcgctgaccctgggctcacagacgcctgt
gccatgaaccagccggcccccgccgccctgcttccgccccggcgcgtgcggctgaagccc
tggctggtggcccaggtcaacagctgccagtacccagggcttcagtgggtcaacggggaa
aagaaattgttttacatcccctggcgccatgccacgcggcacggccctagccatgatgga
gataacaccatcttcaaggcctgggccaaggagacggggaagtacaccgagggggtggac
gaggccgatccggccaagtggaaggccaacctgcgctgtgccctgaacaagagccgtgac
ttccgcctcatctatgatgggccccgggacatgccacctcagccctacaaggtctacgag
gtctgctccaatggcccggctcccgcagagtcacagcccagtgaggataacgctgaggaa
gaagaagaggaagagctccagaagatgttaccaggcctgagcatcacagaagcagtgcag
cccggccctgccatggcaccctattctttacccaaagaggatgtcaagtggccacccact
ctccagccacctgtggtgttggccccccctgctccaggccccaacctgctggtccctgct
cctggcaatgccgctgactttggggaggtgttttctgaggttctgccgagctcgcaaccg
cagcctgggtccctgtctaccagcctggcccccacaggcgaacaactcctgcccgacctg
ttgatcagcccccacatgctgcctctgaccgacctggagatcaagttccagtaccgggga
cggccaccccgggctctcaccatcagcaaccctcaaggctgccggctcttctacagccaa
ctggaagccacccaggagcaggtggagctctttggcccggtgagcctggagcaagtgcgc
ttccccagccccgaggacatccccagcgagaagcaacgcttttataccaaccagctgctg
gacgtcctggaccgtgggctcatccttcagctacaaggccaggatctgtatgccatccgc
ctgtgccagtgcaaggtgttctggagcgggccctgcgcctcagcccagggctcacacccc
aaccccatccagcgggaggtcaagaccaagctcttcagcctggaggacttcctcaatgag
ctcatcctattccagaagggccagaccaacaccccacctccattcgagatcttcttctgc
tttggggaggagtggcctgactgcaaaccccgggagaagaagctcatcactgtacaggtg
gtacccgtagcagcccggatgttgctggagatgttctcgggggagctttcttggtcagct
gatagcatccggctacagatctcaaacccagacctcaaagaccgcatggtggaacagttc
aaggagctccatcacatctggctgtcccagcagcatctgcagcctgtagcccaaacccct
gccatgccaggcctcagtgctgcacagggaccctggcccatgcacccagttggcatgcag
taa
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