KEGG   Bos indicus (zebu cattle): 109558629
Entry
109558629         CDS       T04792                                 
Name
(RefSeq) uncharacterized protein LOC109558629
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03250  Viral life cycle - HIV-1
biu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109558629
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    109558629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109558629
Messenger RNA biogenesis [BR:biu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109558629
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N APOBEC3 SNAD4 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 COX4 dCMP_cyt_deam_1 AID MafB19-deam
Other DBs
NCBI-GeneID: 109558629
NCBI-ProteinID: XP_019815536
UniProt: A0A6P5BEG5
LinkDB
Position
5:117410132..117453608
AA seq 760 aa
MDEYTFTENFNNQGWPCKTYLCYEVERLDGDATIPLDEYKGFVRNKGLXQPEEPCHAELY
FLGKIRSWNLDRNQHYRLTCFISWSPCYDCAQKLTTFLKENRHISLHILASRIYTHNRFG
CHQSGLCELQAAGARITIMTFEDFKHCWETFVDHKGKPFQPWEGLXVKSQALCKKLQAIL
KEHNRCQTVVGAATFFLGFTALLTWEKRCVYGPIPHTFEEEWVAKQTRRMLDVKVAPIQG
FSAKRDYDKNKWKTLELGGGNDFGCSQEQTAAXGSNRQLEARTSFPRPGVLSPGPQESAA
QPRGRAQGKVGLSLRKQSTPGALPPGALLPPPCQTRKEGGLPQSRPGRSLIDKGFFYPRV
LREQVEPLRSRQRPGMQPAYRGYSQMPWTRDSSEHMARLDPETFYFQFCNLLYANRRNCS
YICYKVERRKYHSRASFDWGVFHNQVYGGTRCHTELRFLSWFHAEKLRPNERYHITWFMS
WSPCMKCAKEVADFLGRHQNVTLSIFTSRLYKFQEEGSRQGLLRLSDQGAHVDIMSYQEF
KYCWKKFVYSQRRPFRPWKKLDRNYQRLVEELEDILGNTMNLLREVLFKQQFGNQPRVPA
PYYRRKTYLCYQLKQRNDLTLDRGCFRNKKQRHAEIRFIDKINSLDLNPSQSYKIICYIT
WSPCPNCANELVNFITRNNHLKLEIFASRLYFHWIKSFKMGLQDLQNAGISVAVMTHTEF
EDCWEQFVDNQSRPFQPWDKLEQYSASIRRRLQRILTAPI
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggacgaatataccttcactgagaacttcaacaatcaaggatggccttgcaagacctac
ctgtgctacgaggtggagaggctggacggggacgctacgatccctctggacgagtacaag
ggctttgtgcgcaacaagggtttggrtcaaccggaggaaccctgccatgcagagctctac
ttcctgggaaagatccgttcttggaatctggaccggaatcagcactacaggctcacctgt
ttcatctcctggagcccctgttacgattgtgcccagaaactgactacattcctgaaggag
aaccgccacataagcctgcacatccttgcctcccgcatctatacccacaaccgttttggg
tgccatcagagtggcctgtgcgaactgcaagcggctggggcccgaatcaccatcatgacc
tttgaggactttaagcactgctgggaaaccttcgtggaccacaagggaaaaccctttcag
ccctgggaggggctaartgtaaagagtcaggcgctctgtaaaaaactgcargccattctc
aaggagcacaacaggtgccagacagtggtgggcgcggccacgttcttcctcggcttcacc
gcgctcctcacctgggagaagcgctgygtgtacggccccatcccgcacacctttgaagag
gagtgggtggccaagcagaccaggaggatgctcgacgtgaaggtggcccccatccagggc
ttctcagccaagcgggactacgacaagaacaagtggaagacgctggaacttggaggtggg
aatgatttcggatgcagtcaggagcaaacggcagcaamcggcagcaaccggcaactggaa
gcaagaacttcgtttcccagaccaggagtcctaagccctggaccacaggagtcagcagct
cagccaagagggagggcccaggggaaggtgggtctgagcctgaggaagcaaagcaccccg
ggggccctcccacccggggccctcctcccacccccgtgccaaaccaggaaggagggcggg
cttccgcagagccggcctgggaggtcactcatagataaggggtttttctacccgagagtc
ctgagagagcaagtggagcccctgcgctcaagacaaaggccagggatgcaaccagcctac
cgaggctacagccagatgccctggaccagagactccagcgaacacatggcacggttagat
cctgaaaccttctacttccagttttgcaacctactctatgccaacaggaggaactgctcc
tatatctgctacaaggtggaaagaaggaaataccactcacgtgcctccttcgactggggg
gtctttcataaccaggtctatggtgggactcgctgccacaccgaactccgcttcctgtct
tggttccacgccgagaagctgcgccctaacgagcgttaccacatcacctggttcatgtca
tggagcccctgcatgaagtgtgcgaaggaggtggctgacttcctggggaggcaccagaat
gtgacgctgagcatcttcacctcccgtctctacaaattccaggaggaggggtccaggcag
gggctgctcaggctgagcgaccagggagcccatgtggacattatgtcctaccaagaattc
aaatactgttggaaaaagtttgtatacagtcagagaaggcccttcaggccttggaagaaa
ctagacagaaattatcagcggctggttgaagagcttgaggacattctcggaaacacgatg
aatctgctaagagaagttctgttcaagcagcagtttggcaaccagccccgggtcccagca
ccttactaccggaggaagacctacctgtgctaccagctgaagcagcgtaatgacttgacg
cttgacagaggctgcttccgcaacaagaagcagcggcatgcagaaattcgctttattgac
aagatcaactcactggatctgaacccgagccagagctacaaaatcatctgctatatcaca
tggagcccttgcccgaactgtgccaatgagctggtcaatttcatcaccaggaataaccac
ctgaaactggagatctttgcctcccgcctgtacttccactggatcaagtcatttaagatg
gggctgcaggatctgcagaacgctgggatctcagtggctgtcatgacccacacagagttt
gaagactgctgggaacagtttgtggacaaccagtcaaggcccttccagccctgggacaag
ctggagcaatacagtgcgagcataagacgaaggctccagaggatcctaacggccccaatt
tag

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