Bos indicus (zebu cattle): 109559418
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Entry
109559418 CDS
T04792
Symbol
APAF1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu01524
Platinum drug resistance
biu04115
p53 signaling pathway
biu04210
Apoptosis
biu04215
Apoptosis - multiple species
biu05010
Alzheimer disease
biu05012
Parkinson disease
biu05014
Amyotrophic lateral sclerosis
biu05016
Huntington disease
biu05020
Prion disease
biu05022
Pathways of neurodegeneration - multiple diseases
biu05134
Legionellosis
biu05152
Tuberculosis
biu05160
Hepatitis C
biu05161
Hepatitis B
biu05162
Measles
biu05164
Influenza A
biu05168
Herpes simplex virus 1 infection
biu05169
Epstein-Barr virus infection
biu05200
Pathways in cancer
biu05222
Small cell lung cancer
biu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109559418 (APAF1)
04215 Apoptosis - multiple species
109559418 (APAF1)
04115 p53 signaling pathway
109559418 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109559418 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
109559418 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
109559418 (APAF1)
05160 Hepatitis C
109559418 (APAF1)
05164 Influenza A
109559418 (APAF1)
05162 Measles
109559418 (APAF1)
05168 Herpes simplex virus 1 infection
109559418 (APAF1)
05169 Epstein-Barr virus infection
109559418 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
109559418 (APAF1)
05152 Tuberculosis
109559418 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
109559418 (APAF1)
05012 Parkinson disease
109559418 (APAF1)
05014 Amyotrophic lateral sclerosis
109559418 (APAF1)
05016 Huntington disease
109559418 (APAF1)
05020 Prion disease
109559418 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
109559418 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
109559418 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
109559418 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
NB-ARC
Beta-prop_WDR36-Utp21_2nd
WHD_APAF1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
CARD
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_like
RMC1_N
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR11_2nd
Ge1_WD40
CARD_2
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_IFT140_2nd
AAA_16
Beta-prop_Nup120_160
Utp8_b_propeller
Beta-prop_RSE1_2nd
AAA_22
ATPase_2
NPHP3_N
nSTAND6
AAA_18
DUF2677
Hira
NACHT
nSTAND1
Motif
Other DBs
NCBI-GeneID:
109559418
NCBI-ProteinID:
XP_019816697
UniProt:
A0A6P5BU17
LinkDB
All DBs
Position
5:67426892..67516110
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALERDIKTSYIMDHMISNGVLTVSEEEKVKNEPTQRQRAAMLIKMI
LKKDNHSYISFYNALLHEGYKDLAALLHGGIPVXSSSDGKDSVSGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLSKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSFLEDCFPG
GVHWVSVGKQDKSGLLMKLQNLCARLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDIWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
MKKADLPEQAHSIIQECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDLETEEVEDILQEFVN
KSLLFCDRNGKSFLYYLHDLQVDFLAEKNRSQLQDLHKKMVTQFQRHHQLYSLSPDQEDC
MYWYSFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDGID
CENFQEFLSLNGHLLGRQPFPNIVQLGLCELETSEVYRQAKLQAKQEVDNGMLYLEWVNK
KNMKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGS
NDYFLKLWDLNQEECRNTMFGHXNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKS
INVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHH
SAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTS
SDDQTIRLWETKKVCKNSATVLKQEIDVVFQENEVTVLAVDNIRRLQLINGNTGQIDYLT
EAQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLIS
SSDDSAVQIWNWQSEDPFFLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITRRIEKD
FVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNX
LLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILKILE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttgcttcarcatagagaagccttggaaagggacatc
aaaacatcctacattatggatcacatgattagtaatggagttttaacagtgtcagaggag
gaaaaagtgaaaaatgagcccacccaacggcaacgagcagctatgctaattaaaatgata
cttaaaaaagataatcattcctatatatcrttctacaatgctctacttcatgaaggttac
aaagatcttgctgcccttctgcatggtggcattcctgtyrtctcttcttccgatggcaaa
gattcagttagtggaataacttcgtaygtaaggacagtcctgtgtgaaggtggagtacca
cagaggcccgttgtttttgttactaggaagaagctagtgaatgcaattcagcagaagctc
tccaaactgaatggtgaaccaggatgggtcaccatatatgggatggcaggttgtgggaag
tctgtattagctgcagaagcygttcgagatcattctttcctagaagattgtttcccagga
ggcgtgcattgggtgtcagttgggaaacaggacaaatccgggcttctgatgaaactacag
aacctttgtgcacgattggatcaggatgagagcttctcccagaggcttccacttaatatt
gaagaggctaaagaccgtctccgcattctgatgctgcgcaaacatccaaggtctttattg
atcttggatgatatttgggatccttgggtgttaaaagcttttgacaatcagtgtcaaatt
cttctcacaactagagataagagtgttacagattcagtgatgggtcctaaatatgtagtg
cctgtggagagtggtttaggaaaagaaaaaggacttgaaattttatccctttttgttaat
atgaagaaagcagatttgccagaacaagctcacagtattatacaagaatgtaaaggttcc
cctcttgtagtatctttaattggtgcacttttacgagattttcccaaccgctgggagtac
tacctcaggcaacttcagaataagcaatttaagaggataagaaaatcttcatcttatgac
tatgaggctctagatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gattattacacagatctttccatcttacagaaagatgttaaggtgcctacaaaggtgtta
tgtatcctytgggacttggaaacggaagaagttgaagacatattacaggaatttgttaat
aagtctctcttgttctgtgaccggaatggaaaatcatttctttattatttacatgatctg
caagtagatttccttgctgaaaagaatcgcagccagcttcaggatctccacaagaagatg
gtcactcagttccagagacatcaccagctatattctctttcaccagatcaggaggattgc
atgtattggtacagttttctggcctatcacatggccagtgctaatatgcacaaagaactg
tgtgctttaatgttttccctggattggattaaagcaaaaacggaacttgtaggccctgct
catctgattcatgaatttgtggaatacaggcatatattggatgaaaaggatggtatagac
tgtgagaatttccaggagtttttatctttaaatggacatcttcttggacgacagccattt
cctaatattgtgcaactgggcctctgtgaactggaaacttcagaggtttatcggcaagct
aagctgcaggccaagcaggaggtcgataacggaatgctttacctggagtgggtaaacaaa
aaaaacatgaagaacctctcccgcttggttgtccgcccccatacagatgctgtttaccat
gcttgcttttctgaagatggtcaaagaatagcgtcttgtggagctgataaaactttacag
gtattcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtg
ctttgctgtgcattctctgcagatgacaaatttatagcaacctgctcagtggataaaaaa
gtgaagatttggaattcaatgactggggaactagtgcgtatctatgatgagcactcagag
caagtcaattgctgccacttcaccaacaayagtaatcaccttctcttagcsactggttca
aatgactacttccttaaactctgggatctgaatcaagaagaatgtcgaaataccatgttt
ggccatnacaattcggtcagtcactgcagattttcaccagatgatcaggttttggccagt
tgttcagctgatggaacattaaagctttgggatgtgaaatctgcaaatgagaggaaaagc
attaatgtgaagcaattcttcctgaattcagaggagcctcaggaggatctggaagtgata
gtraaatgctgttcgtggtctgctgatggtgctaagataatggtggctgcgaaaaataaa
gtctttctttttgacattcactccagtggcctgttggcagaaatgcacatgggccatcat
agcgctgtccagtactgtgacttctccccccacaaccatttggcagtggtggctttgtcc
cagtactgtgtggagttgtggagtatggactcaggtttaaaagtagctgattgcagagga
catttaagttgggtccattgtgtgatgttttctcctgatggatcatcgtttttgacatct
tctgatgaccagacaatcaggctctgggagacaaagaaagtatgtaagaactctgctaca
gtgttaaagcaagaaatagatgttgtgtttcaagaaaatgaagtgacggttcttgcagtt
gacaatataagacgtctgcaactcattaatggaaacacaggtcagattgattacctaact
gaagctcaagtgagttgctgttgtttaagtccacatcttcagtaccttgcattcggaggt
gaagatggagccattcagattttagaactcctgaacaacagaatcttccaatccagaaat
gggcacaagaccactgttcggcacatccagttcacagctgatggaaagactcttatctca
agctctgatgattctgcagttcagatatggaactggcaatcagaggaccctttctttctc
caagcccaccaggaaacagtgaaagacttcagactcttgaaaaattcaagacttctttcc
tggtcatttgatggaacagtaaaggtatggaatattattaccagaagaatagaaaaagat
ttcgtgtgtcaccaggatacagttctttcttgtgatatttcctctgatgctactaagttt
tcttctacctctgctgacaagactgcaaagatttggagttttgaactcctttctcctctt
catgaattgagaggccacaaaggctgtgtgcgctgctcttccttctctgtgaacaatasc
ttgttggcgactggagacgacaatggagaaatcaggatatggaatgtctcaaacggtgag
cttcttcatttgtgtgctccgatttcagtagaagaaggagctgctactcatggaggctgg
gtgaccgacctttgcttttctccagacaccaaaatgcttgtttctgctggaggatatctc
aagtggtggaatgttgtcactggggaatcctcacagaccttctacacaaacggaaccaat
cttaagaaaatacacgtgtcccctgacttcaaaacatatgtgactgttgataatcttggt
attttatatattctaaagattttagagtaa
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integrated database retrieval system
