Bos indicus (zebu cattle): 109563408
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Entry
109563408 CDS
T04792
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04064
NF-kappa B signaling pathway
biu04210
Apoptosis
biu04668
TNF signaling pathway
biu05200
Pathways in cancer
biu05202
Transcriptional misregulation in cancer
biu05203
Viral carcinogenesis
biu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
109563408 (TRAF1)
04668 TNF signaling pathway
109563408 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109563408 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109563408 (TRAF1)
05202 Transcriptional misregulation in cancer
109563408 (TRAF1)
05203 Viral carcinogenesis
109563408 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
109563408 (TRAF1)
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Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
XLF_CC
Motif
Other DBs
NCBI-GeneID:
109563408
NCBI-ProteinID:
XP_019822401
UniProt:
A0A6P5C9K9
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Position
8:complement(115682955..115707151)
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AA seq
415 aa
AA seq
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MASGSASSXXAAPDENEFPFGCPPTACQDPPEPGPVCCAVCLSEKVRNDEDRICPKCKGD
DTPSESPGSLLSQEKDHPEVAEAGVGCPFAGVGCSFKGSPKFMEEHEVTSQAAHLNLLLG
FMKQWKAQLGSGLGYGPMALERNLSDLQLXXAVEVAGDLEVDCYRAPCSESQDELALHHF
MKEKLLNELEGKLCVFENIVAVLNKEVEASPLALAASIHQSQLDREHILSLEQRVLELQQ
TLAQKDQALGKLEQSLRLVEEASYDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKY
GYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDA
FRPDLNSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFVKCVVDTNT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggctcagccagcagtcnnngtgcggcccccgatgagaacgagttccccttt
gggtgcccccccactgcctgccaggaccccccagagcccggccctgtctgctgcgccgtc
tgtctctctgagaaagtgaggaatgacgaggatcggatctgtcccaaatgcaaaggggat
gacaccccatctgaaagtccaggaagccttctgtctcaggagaaggatcaccccgaggtg
gctgaggctggagttgggtgcccctttgcaggtgtcggctgctccttcaagggaagccca
aagttcatggaggagcatgaggtcacctcccaggccgcccacctgaacctgctgttgggg
ttcatgaagcagtggaaggcccagctgggctctggcctggggtaygggcccatggccctg
gaacggaacctgtcagacctgcagctnnnnnnggccgtggaggtggccggggacctggag
gtggactgctaccgggccccctgctccgagagccaggacgagctggccctgcatcacttc
atgaaggagaagctcctgaacgagctggaagggaagctgtgtgtgttcgagaacattgtc
gctgtcctcaacaaggaggtggaggcctcccccctggccctggccgcctccattcaccag
agccagctggaccgcgaacacatcctgagcctggagcagagggtgttggagttgcagcag
accctggcccagaaggaccaggccttgggcaagctggagcagagcctgcgcctcgtggag
gaggcctcctacgayggcaccttcctctggaagatcaccaacgtcacccgccgatgccat
gagtcggcctgtggcaggaccgtcagcctcttctccccagctttctacaccgccaagtac
ggatacaagctgtgcctgcggctctacctgaatggggatgggacggggaagaggacccac
ctgtccctcttcatcgtgatcatgagaggggagtatgatgctctgctgccatggcctttc
aggaacaaggtcaccttcatgctgctggaccagaacaaccgtgaacacgccatcgacgcc
ttccggcccgacctgaactccgcttccttccagcggccccagagcgagaccaacgtggcc
agcggctgcccgctcttcttccccctcaacaagctgcagtcgcccaagcacgcctacgtg
aaggacgacaccatgttcgtcaagtgcgtcgtggacactaacacttag
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