Bos indicus (zebu cattle): 109568743
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Entry
109568743 CDS
T04792
Symbol
MMP13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04657
IL-17 signaling pathway
biu04926
Relaxin signaling pathway
biu04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
109568743 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
109568743 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
109568743 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
biu01002
]
109568743 (MMP13)
Peptidases and inhibitors [BR:
biu01002
]
Metallo peptidases
Family M10
109568743 (MMP13)
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
109568743
NCBI-ProteinID:
XP_019829709
UniProt:
A0A6P5CX17
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Position
15:4726713..4738568
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AA seq
471 aa
AA seq
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MXPRVLAGFLFFSWTACWSLPLPSDGDSEDLSEEDFQFAESYLKSYYYPQNPAGILKKTA
ASSVIDRLREMQSFFGLEVTGRLDDNTLDIMKKPRCGVPDVGEYNVFPRTLKWSKMNLTY
RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTRIHNGXADIMISFGTKEHGDFYPFDG
PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALM
FPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPYSKHPKTPDKCDPSLSLDAITSLRGET
LIFKDRFFWRLHPQQVEAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALSGY
DILEDYPKKISELGFPKHVKKISAALHFEDSGKTLFFSENQVWSYDDTNHVMDKDYPRLI
EEVFPGIGDKVDAVYQKNGYIYFFNGPIQFEYSIWSNRIVRVMTTNSLLWC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcrcccaagggtcctggctggcttcctcttcttcagctggacggcttgttggtcyctg
ccccttcccagtgatggagattctgaagacttgtccgaggaagacttccagtttgcagag
agctacctgaaatcatactactatcctcagaatcctgctggaatcctgaagaaaactgca
gcaagctctgtgattgacaggcttagagaaatgcagtcattttttggcttagaggtgact
ggcagacttgatgataacaccttagacatcatgaaaaaaccaagatgtggggtccctgat
gtgggtgaatacaatgtttttcctcgaactctcaagtggtccaaaatgaacttaacctac
agaattgtgaattatacacctgatctgactcattctgaagtggaaaaggccttcagaaaa
gccttcaaggtgtggtctgatgtgacacctctgaattttaccagaattcacaatggcrct
gctgatatcatgatctcttttggaactaaagagcayggtgacttctacccatttgatggr
ccctctggtctgttggctcacgctttccctcctggaccaaattatggaggagatgctcat
tttgatgatgatgaaacctggacaagtagttccaaaggctacaacttgtttcttgttgct
gcccatgagtttggccattccttaggattggaccactccaaggacccaggagcactcatg
tttcccatctacacctacactggcaaaagccactttatgcttcctgatgatgatgtccaa
gggattcagtctctctayggtccaggagatgaagacccctactctaaacatcccaaaacg
ccagacaaatgtgacccttccttatcccttgatgccataaccagtctccgcggagaaaca
ctgatctttaaagacagattcttctggcggctgcatcctcagcaggttgaagcagagctg
tttttaacaaaatcgttttggccagaacttcccaaccgtattgatgccgcctatgagcac
ccttcccatgaccttatcttcatctttagaggcagaaaattttgggcacttagtggttat
gatattctggaagattacccaaaaaaaatatctgaactgggatttccaaaacacgttaaa
aagatcagcgcagcccttcactttgaggattcagggaagacgctcttcttttcagaaaac
caagtctggagctatgatgacactaaccatgtgatggataaagactacccgagactcatt
gaagaggtcttcccaggaattggtgataaagtagatgctgtctaccagaaaaatggttat
atctattttttcaatggacccatacagtttgaatacagcatctggagtaaccgtattgtt
cgagtcatgacaacaaattccttattgtggtgttaa
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