KEGG   Bos indicus (zebu cattle): 109570391
Entry
109570391         CDS       T04792                                 
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03015  mRNA surveillance pathway
biu05014  Amyotrophic lateral sclerosis
biu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109570391 (TARDBP)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    109570391 (TARDBP)
   05022 Pathways of neurodegeneration - multiple diseases
    109570391 (TARDBP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109570391 (TARDBP)
Messenger RNA biogenesis [BR:biu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     109570391 (TARDBP)
SSDB
Motif
Pfam: TDP-43_C TDP-43_N RRM_1 RRM_7 RRM_PARP14_3 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 109570391
NCBI-ProteinID: XP_019831874
UniProt: A0A6P5D3A1
LinkDB
Position
16:complement(39347384..39355301)
AA seq 414 aa
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtctgaatatattcgggtaaccgaagatgagaatgacgagcccattgagataccatcg
gaagacgatgggacagtgctgctgtccacggttacagcccagtttccaggggcatgtggg
ctgcgctaccggaatccagtgtctcagtgtatgagaggtgtccgtctggtagaaggaatt
ctgcacgcccccgatgctggctgggggaatctggtatatgttgtcaactatcccaaagat
aacaaaagaaaaatggatgaaacagatgcttcatcagcagtgaaagtgaaaagagcggtc
cagaaaacatctgatttaatagtgttgggtctcccatggaaaacaactgaacaggatctg
aaagattacttcagtacctttggagaagttcttatggttcaggtcaagaaggatattaaa
actggtcattcaaaagggtttggcttcgttcgcttcacggaatatgaaacccaggtgaaa
gtaatgtcacaacgacatatgatagatggacgatggtgtgactgtaaacttccaaattct
aagcaaagcccagatgagcctttgagaagcagaaaggtgtttgttgggcgttgtacagag
gacatgacwgctgatgaactgcggcagttcttttgccagtatggagaagtggtagatgtc
ttcatccccaaaccattcagggcttttgcctttgttacgtttgcagatgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
ggtggctttgggaatcagggtggatttggaaatagtcgagggggtggagcgggtttggga
aacaatcagggtagtaatatgggtggagggatgaactttggtgcttttagcattaaccca
gcaatgatggctgcggcccaggctgctctgcagagcagctggggtatgatgggcatgtta
gccagtcagcagaaccagtctggcccatcaggtaataaccaaagccaaggcaacatgcag
agggagccaaatcaggcttttggttctggaaataactcttacagtggttctaattcaggt
gcagcgattggttggggatcggcatcaaatgcagggtcaggcagtggttttaatggaggc
ttcggctctagcatggattctaaatcttctggctggggaatgtag

DBGET integrated database retrieval system