Bos indicus (zebu cattle): 109570391
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Entry
109570391 CDS
T04792
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03015
mRNA surveillance pathway
biu05014
Amyotrophic lateral sclerosis
biu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109570391 (TARDBP)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109570391 (TARDBP)
05022 Pathways of neurodegeneration - multiple diseases
109570391 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109570391 (TARDBP)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109570391 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
109570391
NCBI-ProteinID:
XP_019831874
UniProt:
A0A6P5D3A1
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Position
16:complement(39347384..39355301)
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AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatatattcgggtaaccgaagatgagaatgacgagcccattgagataccatcg
gaagacgatgggacagtgctgctgtccacggttacagcccagtttccaggggcatgtggg
ctgcgctaccggaatccagtgtctcagtgtatgagaggtgtccgtctggtagaaggaatt
ctgcacgcccccgatgctggctgggggaatctggtatatgttgtcaactatcccaaagat
aacaaaagaaaaatggatgaaacagatgcttcatcagcagtgaaagtgaaaagagcggtc
cagaaaacatctgatttaatagtgttgggtctcccatggaaaacaactgaacaggatctg
aaagattacttcagtacctttggagaagttcttatggttcaggtcaagaaggatattaaa
actggtcattcaaaagggtttggcttcgttcgcttcacggaatatgaaacccaggtgaaa
gtaatgtcacaacgacatatgatagatggacgatggtgtgactgtaaacttccaaattct
aagcaaagcccagatgagcctttgagaagcagaaaggtgtttgttgggcgttgtacagag
gacatgacwgctgatgaactgcggcagttcttttgccagtatggagaagtggtagatgtc
ttcatccccaaaccattcagggcttttgcctttgttacgtttgcagatgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
ggtggctttgggaatcagggtggatttggaaatagtcgagggggtggagcgggtttggga
aacaatcagggtagtaatatgggtggagggatgaactttggtgcttttagcattaaccca
gcaatgatggctgcggcccaggctgctctgcagagcagctggggtatgatgggcatgtta
gccagtcagcagaaccagtctggcccatcaggtaataaccaaagccaaggcaacatgcag
agggagccaaatcaggcttttggttctggaaataactcttacagtggttctaattcaggt
gcagcgattggttggggatcggcatcaaatgcagggtcaggcagtggttttaatggaggc
ttcggctctagcatggattctaaatcttctggctggggaatgtag
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