Bos indicus (zebu cattle): 109573332
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Entry
109573332 CDS
T04792
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu00514
Other types of O-glycan biosynthesis
biu04330
Notch signaling pathway
biu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109573332 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109573332 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
109573332 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
biu01003
]
109573332 (RFNG)
Enzymes [BR:
biu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
109573332 (RFNG)
Glycosyltransferases [BR:
biu01003
]
Glycan extension
O-Glycan
109573332 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
109573332
NCBI-ProteinID:
XP_019836051
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All DBs
Position
19:52301845..52306714
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AA seq
377 aa
AA seq
DB search
MMAHLWGGNQTPEDHCPGTPKGRYALPAAILTAASSKPRGRHGRPRPRCGQAAGAAAPDP
RNSSSKRKPGPSSTGDAAGRAGCPWLTTLPSPGSPNPGSPVQLHSPLLTRSRPCQAQSPW
GGGLPLETSQVISLQTFIFTDGDDPELQLQGGGHVINTNCSAVHTRQALCCKMSVEYDKF
IESGRKWFCHVDDDNYVNPKGLLQLLSTFSPSQDIYLGRPSLDHPIEATERIQGGGTVTT
VKFWFATGGAGFCLSRGLALKMSPWASLGGFMSTAERVRLPDDCTVGYIVEGLLGARLLH
SSLFHSHLENLQKLSPDTLLQQVTLSYGGPENPQNVVNVAGGFSLQQDPTRFKSIHCLLY
PDTDWCPVQKQSDLAPR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccatctctggggcgggaaccagacgccggaggaccactgcccagggaccccc
aagggtcgctacgcgctcccagccgccatcctgacagcagcctcctccaagccacgggga
agacacgggcggcctcgaccccggtgcggccaagcagccggagccgcagcgccggacccc
agaaactcctccagcaagaggaagcctggtcctagcagcactggggatgctgcgggtaga
gcaggctgtccctggctcaccaccctcccttctcctggatccccaaacccaggctcacct
gtccagcttcattcacccttgctcaccaggtcaaggccctgccaggcccagagtccctgg
ggtggagggctgccccttgaaacctcacaggtcatctctctacagacgtttatctttacc
gacggggatgaccctgaactacagctccagggaggtggccatgtcatcaacaccaattgc
tctgccgtgcacacccgccaggctctgtgctgcaagatgtcagtggaatatgacaagttt
attgagtccggacgcaagtggttctgccacgtggatgatgacaactatgtgaaccccaaa
ggcctgctgcagctgctgtccaccttctcacccagccaggacatctacctggggcggccc
agcctggaccaccccatcgaggctaccgagaggatccagggaggtggaaccgtgaccacg
gtcaagttctggttcgctaccggtggggccgggttctgcctaagtagaggccttgctctc
aagatgagcccatgggccagcctgggtggcttcatgagcacagccgagcgggtacggctg
ccagacgactgcacggtgggctacatcgtggaggggctgctgggcgctcgcctgctgcac
agctcgctgttccactcccacctggagaacctacaaaagctatcacccgacaccctgctc
cagcaggtcaccctgagctacgggggacctgagaacccacagaatgtggtgaacgtggct
gggggcttcagcctgcagcaggatcccacgcggtttaagtccatccactgccttctctac
ccggacacggattggtgtcctgtgcagaagcagagcgaccttgcccctcggtga
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