Bos indicus (zebu cattle): 109573775
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Entry
109573775 CDS
T04792
Symbol
SCN4A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
biu04040
]
109573775 (SCN4A)
Ion channels [BR:
biu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109573775 (SCN4A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
109573775
NCBI-ProteinID:
XP_019836762
UniProt:
A0A6P5DHV0
LinkDB
All DBs
Position
19:complement(49684342..49716503)
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AA seq
1834 aa
AA seq
DB search
MAKASLPTVVPLGPESLRPFTRESLAAIERRVLEEEARQLRNKQMEIEETEQKPRSDMEA
GKNLPLIYGDPPPELIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYILSPFSIV
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKILARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISAXRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNSTWYGNDTW
YGNDTWGGNDTWGGNDTWGGQESWAGNYTFDWDAYISDEGNFYFLEGSNDALLCGNSSDA
GHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEELEKAK
AAQALEGGEVDGDPAHSKDCNGSLDTSAGEKGPPRPSCGTDSGISDAMEELEEAHQKCPP
WWYKCSHKVLIWNCCTPWVKFKKIVNLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHF
DSVLNVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSY
KECVCKIAADCNLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVM
VIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIARITWGIGFAKAFLVGLLHG
KVLSPKVIMLSLGSIGEDGEAGEAPESAPEDEKKEPPPEEDGKDLKKDNHILNHVGLADG
PPPSIELDHLNFINNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDVKKPLQPLDGNSS
VCSTADYKPPEDDPEEQAEENPDGEQPEECFTEACVQRFPFLYVDISQGRGKKWWTLRRA
CFKIVEHNWFETFIVFMILLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFILEMLLK
WVAYGFKVYFTNAWCWLDFLIVDXSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDITEV
NNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQP
QYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPQNKVQGMVYDLVTKQAFDITIMILICLNMVTMMVETDDQSQLKVD
ILYNINMVFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVS
PTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSN
FAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPNLENPGTS
IRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYET
WEKFDPDATQFIDYSRLSDFVDTLQEPLRIAKPNKIKLITMDLPMVPGDKIHCLDILFAL
TKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLL
QRSVKQASYMYRHNHDGGRDGAPEKEGLIADTMSKMYGPDNGNSGVPSKEEERGSTGDPG
PAMGLRPISPSDAPLPPAPPLGQTVRPGVKESLV
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcgtctctgcccacggtggtgcctctgggccccgagagcctacgccccttc
acccgggagtccctggcagccatagagcgccgggtgttggaggaggaggcccggcagttg
cggaacaagcagatggagatcgaggaaaccgagcagaagccgcgcagcgacatggaggct
ggcaagaacctgccsctcatctacggggaccccccgccggagctcattggcatccccctg
gaggatctggatccctactacagcgacaagaagaccttcatcgtgctcaacaagggcaag
tccatcttccgcttctcagccactcctgctctctacatcctgagccccttcagcatcgtc
agacgctgcgccatcaaggtgctcatccactcgctgttcagcatgttcattatgatcacc
atcctgaccaactgcgtgttcatgaccatgagcgacccgccttcctggtccaagcacgtg
gagtacaccttcacagggatctacaccttcgagtccctcatcaagatcctggcccgaggc
ttctgcatcgatgacttcacattcctccgggatccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggaatttgtggacttgggcaacatctcagcnntgagaacc
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagaccatcgtg
ggggccctgatccagtcggtaaaaaaactctcggacgtgatgatcctcactgtcttctgc
ctgagcgtctttgccctggtggggctgcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccttcaatgacaccaactccacgtggtatggcaacgacacgtgg
tacggcaacgacacctggggcggcaatgacacctggggcggcaacgacacctggggcggc
caggagagctgggccggcaactatacctttgactgggatgcctacatcagtgatgaaggg
aacttctatttcctggagggctccaatgacgccctgctctgtgggaacagcagcgatgct
gggcattgccctgaaggttatgagtgcatcaaggccgggcggaaccccaactacggctac
accagctacgacaccttcagctgggccttcctggctctcttccgtctcatgacacaggac
tattgggagaacctcttccagctgacccttcgagcagccggcaagacctacatgatcttt
ttcgtggtcatcattttcctgggctccttctacctcatcaacctgatcctggctgtggta
gccatggcctacgctgagcagaacgaggccaccctggccgaggatcaggagaaagaagag
gagtttcagcagatgctggagaaattcaaaaaacagcaggaggagctggagaaggccaag
gccgcccaggctctggaaggtggggaggtggacggggacccagcacacagcaaagactgc
aacggcagcctggacacatcggcgggggagaaggggcctccgaggccaagctgcggcaca
gacagcggtatttccgatgccatggaagagctggaagaggcccaccagaagtgcccacca
tggtggtacaaatgttcccataaagtgctgatatggaactgctgcaccccgtgggtgaag
ttcaagaagatcgtcaacctgatcgtcatggaccccttcgtggacctgggcatcaccatc
tgcatcgtgctcaacactctcttcatggccatggagcattacccaatgacagagcacttt
gacagtgtgctcaacgtgggcaacctggtcttcacaggcatcttcacagctgagatggtg
ctgaagctcattgccatggacccctacgagtacttccagcagggctggaacatcttcgac
agtatcatcgtcaccctcagcctggtggagctgggcctggccaatgtgcaggggctgtcg
gtgctccgctccttccgtctgctgagggtcttcaagctggccaagtcatggccgacgctg
aacatgcttatcaagatcatcggcaactcggtgggggcgctgggcaacctgacgctggtg
ctggccatcattgtgttcatcttcgccgtggtgggcatgcagctgtttggcaagagctac
aaggagtgcgtgtgcaagatcgccgcggactgcaacctgccccgctggcacatgcatgac
ttcttccactcctttctcatcgtcttccgcatcctgtgcggggagtggatcgagaccatg
tgggactgcatggaggtggccggccaggccatgtgcctcactgtcttcctcatggtcatg
gtcatcggcaacctggtggtcttgaacctgttcttggccctgctgctcagctcgttcagt
gccgacagcctggcggcctcggatgaggatggcgagatgaacaacctgcagattgccatc
gctcgcatcacgtggggcatcggcttcgccaaagccttcctcgtggggctgctgcatggc
aaggtgctgagccccaaggttatcatgctcagccttggaagcatcggcgaggatggggag
gccggcgaggctccagaaagcgcccccgaggatgagaagaaggagcctccacccgaggag
gatggcaaggacctcaagaaggacaaccacatcctgaaccacgtgggtctggctgacggc
cctccccccagcattgagttggaccacctcaacttcatcaacaacccctacctgaccatc
cacgtgcccatcgcctccgaggagtctgacctggagatgcccacagaggaggaaactgac
accttctctgagcctgaggatgtcaagaagccgctgcagcccctggatgggaactcctcc
gtctgcagcactgctgactacaagccccctgaggacgaccccgaggaacaggccgaggag
aaccctgatggggagcagcctgaggagtgcttcaccgaggcctgcgtgcagcgctttccc
ttcctctacgtggacatctcccagggtcgagggaagaagtggtggaccctccgcagggcc
tgcttcaagatcgttgagcacaactggtttgagaccttcattgtcttcatgatcctgctc
agcagtggggccttggccttcgaggacatccacattgagcagcggcgagtcatccgcacc
atcctggagtacgccgacaaggtcttcacctacatcttcatcctggagatgctactcaag
tgggtggcctacggcttcaaggtgtacttcaccaatgcctggtgctggctcgacttcctc
atcgtggacgyctccatcatcagcctggtggccaactggctgggctactcggagctggga
cccatcaaatccctgcggacgctgcgggccctgcgccccctgagggcactgtctcgattc
gagggcatgagggtggtggtgaatgccctcctgggagccatcccctccatcatgaacgtg
ctgctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgtttgcc
ggcaagttctactactgcatcaacaccaccacctccgagagattcgacatcaccgaggtc
aacaacaagtccgagtgcgagagcctgatgcacacgggccaggtccgctggctcaacgtc
aaggtcaactacgacaacgtgggcctcggctacctctcgctcttgcaggtggccaccttc
aagggctggatggacatcatgtatgctgccgtggactcccgggagaaggaagagcagcca
cagtatgaggtgaacctctacatgtacctctatttcgtcatcttcatcatcttcggctcc
ttcttcaccctcaacctcttcattggcgtcatcatcgacaacttcaaccagcagaagaag
aagtttggagggaaagacatcttcatgacagaggaacagaagaaatactataacgccatg
aagaagcttggctccaagaagcctcagaagccaattccccggccccagaacaaggtccag
ggcatggtgtacgacctggtgaccaagcaggcgttcgacatcaccatcatgatcctcatt
tgcctcaacatggtcaccatgatggtggagacggacgaccagagccagctcaaggtggac
atcctgtacaacatcaacatggtcttcatcatcatcttcacgggcgagtgcgtgctcaag
atgctggccctgcgccagtactacttcaccgtcggctggaatatcttcgactttgtggtc
gtcatcctgtccattgtgggcctggcgctctccgacctgatccagaaatacttcgtctca
cccacgctgttccgtgtgatccgcctggcgaggatcgggcgggtcctgcggctgatccgc
ggggccaagggcatccggacgctgctcttcgcgctcatgatgtcgctgcccgccctcttc
aacatcggcctcctcctcttcctggtcatgttcatctactccatcttcggcatgtccaac
ttcgcctacgtcaagaaggagtcgggcatcgacgacatgtttaacttcgagacctttggc
aacagcatcatctgcctcttcgagatcaccacgtcggccggctgggatgggctcctcaac
cccatcctcaacagcgggccccctgactgtgaccccaacctggagaacccgggcaccagc
atccggggcgactgtggcaacccctccatcggcatctgcttcttctgcagctacatcatc
atttccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcaacgtg
gccacggaggagagcagcgagcctcttggggaggatgacttygagatgttctacgagaca
tgggagaagttcgacccygacgccacgcagttcatygactacagccgcctctccgacttc
gtggacaccctgcaggagccgctgaggatcgccaagcccaacaagatcaagctcatcacg
atggacctgcccatggtgccgggggacaagatccactgcctggacatcctctttgccctg
accaaagaggtcctgggtgactccggggagatggacgccctcaaggagaccatggaggag
aagttcatggccgccaacccctccaaggtctcctatgagcccatcaccaccaccctcaag
aggaagcacgaagaagtgtgcgccatcaagatccagagggcctaccgccggcatctgctg
cagcgctccgtgaagcaggcctcttacatgtaccgccacaaccatgacggcggcagggac
ggggcccccgagaaggaggggctgatcgctgacaccatgagcaagatgtacggccccgac
aacgggaacagcggtgtgccgagcaaagaggaggagaggggctccacaggggaccccgga
cctgccatggggctcaggcccatcagcccctctgacgcacccctccctcccgccccaccc
ctggggcagacggtgcgcccaggggtcaaagagtctctcgtctag
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