Bos indicus (zebu cattle): 109576432
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Entry
109576432 CDS
T04792
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
biu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109576432 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
109576432 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109576432 (LSM3)
03041 Spliceosome [BR:
biu03041
]
109576432 (LSM3)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109576432 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
109576432 (LSM3)
Spliceosome [BR:
biu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109576432 (LSM3)
Complex C
U2 snRNP components
109576432 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
109576432
NCBI-ProteinID:
XP_019840618
UniProt:
A0A6P5DQD6
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All DBs
Position
22:complement(59773230..59781367)
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AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaacgaccaacactgtggaagagcccttggatctc
atccggctcagcctggacgagcgcatctacgtgaagatgaggaacgacagagagctccga
ggcaggttgcatgcttatgatcagcatttaaatatgatattgggagatgtggaagaaact
gtgacaactatagaaattgatgaagaaacatatgaagagatatataaatcaacaaaacgg
aatattccgatgctctttgtacggggagacggtgttgtgctagttgccccgccactgaga
gttggctga
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