Bos indicus (zebu cattle): 109578986
Help
Entry
109578986 CDS
T04792
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04360
Axon guidance
biu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109578986 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
109578986 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109578986 (SLIT1)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
109578986 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_1
LRR_9
LRRCT
LRR_14
LRR_EndoS
FNIP
Motif
Other DBs
NCBI-GeneID:
109578986
NCBI-ProteinID:
XP_019843992
LinkDB
All DBs
Position
26:20965711..21107222
Genome browser
AA seq
896 aa
AA seq
DB search
MDDCWVGASVRVSKVPPSPQGRSVQAHGLLXGSATGLHLEATPDGDGERLPPSGTEAGRA
AWRLGATGCPALCTCAGTTVDCHGTGLRAVPKNIPRNTERLELNGNNITRIHKNDFAGLK
QLRVLQLMENQIGVVERGAFDDMKELERLRLNRNLLHTLPELLFQNNQALSRLDLSENTI
QAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP
KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPAGLRGLNVAEVQKSEFSCSG
QGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPEAMTEIRLELNGIKSIP
PGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQL
LLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDC
NLKWLADFLRSNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGAEDYQLNS
ECNSDVVCPHKCRCEASMVECSSLKLTKIPERVPQATAELRLNNNEISILEATGMFKKLT
HLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRI
SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDW
LRKRKIVTGNPRCQNPDFLRQIPLQDVASPDFRCEEGQEEGGCLPRPQCPQECACLDTVV
RCSNKHLQTLPKGIPKNVTELYLDGNQFTLVPAQLSTFKYLQLVDLSNNKISSLSNSSFT
NMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgctgggtgggagcgagcgtgcgggtgagcaaggtgccacccagcccgcaa
gggcgcagcgtacaagctcacggtctcctcrgtggctctgccacgggactgcacctggag
gccaccccggacggggatggtgagcggctgccgccgtctggcacggaagcgggacgcgcc
gcgtggcgcctgggtgccaccgggtgccccgccctctgcacctgcgctggcaccacggtg
gattgccacggcaccgggctgcgggccgttcccaagaacatcccgcggaacacggagcgc
ctggaactcaatggcaacaacatcactcggatccacaagaacgacttcgcgggactcaag
cagctgcgggtgctgcagctgatggagaaccagattggagtggtggaacggggggctttt
gatgacatgaaggagctggagcggctacgactcaaccggaacctgttgcacacgttacca
gagctgctgttccagaataaccaggctctgtcgaggctggacctaagtgagaacaccatc
caggccatccccagaaaggctttccgtggcgctacagatctcaaaaatttacagctagac
aagaaccagattggctgcattgaggaaggagctttccgggctctgcgggggttagaggtg
ctgaccctgaacaacaacaacatcaccacgatccccgtgtccagcttcaaccacatgccc
aagctgcggaccttccgcctgcactccaaccacctgttctgtgactgccacctggcctgg
ctctcccagtggctgaggcaacggccaaccatcgggctcttcacccagtgctccggcccc
gctggcctgcgcggcctcaatgtggctgaggtccagaagagtgagttcagctgctcaggc
cagggggaggcggggcgcacgccctcctgcaccctctcctccggctcctgtccggccatg
tgcgcctgcagcaacggcatcgtggattgtcgtggcaaaggcctgaccgccatccctgcc
aacctgcccgaggccatgacagagatccggctggagctcaatgggatcaagtccatcccc
ccgggggccttctctccctacagaaagctgcggaggatagacttgagcaacaaccagatc
tcggagatcgcgcctgatgccttccagggcctccggtccctgaactcactggtcctctat
gggaacaagatcacagacctcccccagggcgtgtttggaggcctgttcaccctacagctc
ctgctcctgaatgccaacaagatcaactgcatccggctcgacgccttccaggatctgcag
aacctctcactgctctccctgtatgacaacaagatccagagtcttgctaagggcaccttc
acctccctgcgggccatccagaccctgcatctggcccagaaccccttcatctgtgactgt
aacctcaagtggctggcagacttcctgcgctccaaccccatcgagaccagtggggcccgc
tgtgccagcccccgacgccttgccaacaagcgcatcggccagatcaaaagcaagaagttc
cggtgctcagccaaagagcagtacttcattccaggcgctgaggactaccagctgaacagc
gagtgcaacagcgacgtggtctgtcctcacaagtgccgctgtgargccagcatggtggaa
tgctccagcctgaagctcaccaagatccctgagcgcgtaccccaggccacggccgagcta
cgattaaacaacaatgagatttccatcctggaggccaccgggatgtttaaaaaactcacc
catctgaagaaaataaacctgagcaacaacaaggtgtcggagattgaagacggggccttc
gagggcgcagcctcagtgagcgagctgcacctgaccgccaaccaactggagtccatccgg
agcggcatgttccggggcctggaaggcctgaggacgctgatgctgaggaacaaccgtatc
agctgcatccacaacgacagcttcacgggcctgcgcaacgtgcgcctcctctcgctctac
gacaaccagatcgccaccatctccccgggagccttcgacacgctgcaggccctctccacg
ctaaaycttctggccaaccctttcaactgcaattgccagctggcgtggctgggcgactgg
ctgcgcaagaggaagatcgtgacggggaacccgcggtgccagaacccagacttcttgcgg
cagattcccctgcaggacgtggcctcccccgacttcaggtgtgaagaaggccaggaggag
gggggctgcctgccccgcccgcagtgcccccaggagtgcgcctgcctggacaccgtggtt
cgatgcagcaacaagcacctccagaccctgcccaagggcatccccaagaatgtcacagag
ctctacctggatgggaaccagttcacgctggttccagcacagctgtccaccttcaagtac
ctgcagcttgtggacctgagtaacaacaagatcagttccttaagcaattcgtcctttacc
aacatgagccagctgaccactctgatcctcagctacaactccctgcagtgtatccckcct
ctggccttccaggggcttcgctccctgcgcctgctgtccctgcatggcaatgacatctcc
accctccaagagggcatctttgcagacgtgacttccctgtctcacctgtaa
DBGET
integrated database retrieval system