Bos indicus (zebu cattle): 109578986
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Entry
109578986 CDS
T04792
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
109578986 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109578986 (SLIT1)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
109578986 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_1
LRR_9
LRRCT
LRR_14
LRR_EndoS
FNIP
Motif
Other DBs
NCBI-GeneID:
109578986
NCBI-ProteinID:
XP_019843992
UniProt:
A0A6P5E3W3
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All DBs
Position
26:20965711..21107222
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AA seq
896 aa
AA seq
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MDDCWVGASVRVSKVPPSPQGRSVQAHGLLXGSATGLHLEATPDGDGERLPPSGTEAGRA
AWRLGATGCPALCTCAGTTVDCHGTGLRAVPKNIPRNTERLELNGNNITRIHKNDFAGLK
QLRVLQLMENQIGVVERGAFDDMKELERLRLNRNLLHTLPELLFQNNQALSRLDLSENTI
QAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP
KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPAGLRGLNVAEVQKSEFSCSG
QGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPEAMTEIRLELNGIKSIP
PGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQL
LLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDC
NLKWLADFLRSNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGAEDYQLNS
ECNSDVVCPHKCRCEASMVECSSLKLTKIPERVPQATAELRLNNNEISILEATGMFKKLT
HLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRI
SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDW
LRKRKIVTGNPRCQNPDFLRQIPLQDVASPDFRCEEGQEEGGCLPRPQCPQECACLDTVV
RCSNKHLQTLPKGIPKNVTELYLDGNQFTLVPAQLSTFKYLQLVDLSNNKISSLSNSSFT
NMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgctgggtgggagcgagcgtgcgggtgagcaaggtgccacccagcccgcaa
gggcgcagcgtacaagctcacggtctcctcrgtggctctgccacgggactgcacctggag
gccaccccggacggggatggtgagcggctgccgccgtctggcacggaagcgggacgcgcc
gcgtggcgcctgggtgccaccgggtgccccgccctctgcacctgcgctggcaccacggtg
gattgccacggcaccgggctgcgggccgttcccaagaacatcccgcggaacacggagcgc
ctggaactcaatggcaacaacatcactcggatccacaagaacgacttcgcgggactcaag
cagctgcgggtgctgcagctgatggagaaccagattggagtggtggaacggggggctttt
gatgacatgaaggagctggagcggctacgactcaaccggaacctgttgcacacgttacca
gagctgctgttccagaataaccaggctctgtcgaggctggacctaagtgagaacaccatc
caggccatccccagaaaggctttccgtggcgctacagatctcaaaaatttacagctagac
aagaaccagattggctgcattgaggaaggagctttccgggctctgcgggggttagaggtg
ctgaccctgaacaacaacaacatcaccacgatccccgtgtccagcttcaaccacatgccc
aagctgcggaccttccgcctgcactccaaccacctgttctgtgactgccacctggcctgg
ctctcccagtggctgaggcaacggccaaccatcgggctcttcacccagtgctccggcccc
gctggcctgcgcggcctcaatgtggctgaggtccagaagagtgagttcagctgctcaggc
cagggggaggcggggcgcacgccctcctgcaccctctcctccggctcctgtccggccatg
tgcgcctgcagcaacggcatcgtggattgtcgtggcaaaggcctgaccgccatccctgcc
aacctgcccgaggccatgacagagatccggctggagctcaatgggatcaagtccatcccc
ccgggggccttctctccctacagaaagctgcggaggatagacttgagcaacaaccagatc
tcggagatcgcgcctgatgccttccagggcctccggtccctgaactcactggtcctctat
gggaacaagatcacagacctcccccagggcgtgtttggaggcctgttcaccctacagctc
ctgctcctgaatgccaacaagatcaactgcatccggctcgacgccttccaggatctgcag
aacctctcactgctctccctgtatgacaacaagatccagagtcttgctaagggcaccttc
acctccctgcgggccatccagaccctgcatctggcccagaaccccttcatctgtgactgt
aacctcaagtggctggcagacttcctgcgctccaaccccatcgagaccagtggggcccgc
tgtgccagcccccgacgccttgccaacaagcgcatcggccagatcaaaagcaagaagttc
cggtgctcagccaaagagcagtacttcattccaggcgctgaggactaccagctgaacagc
gagtgcaacagcgacgtggtctgtcctcacaagtgccgctgtgargccagcatggtggaa
tgctccagcctgaagctcaccaagatccctgagcgcgtaccccaggccacggccgagcta
cgattaaacaacaatgagatttccatcctggaggccaccgggatgtttaaaaaactcacc
catctgaagaaaataaacctgagcaacaacaaggtgtcggagattgaagacggggccttc
gagggcgcagcctcagtgagcgagctgcacctgaccgccaaccaactggagtccatccgg
agcggcatgttccggggcctggaaggcctgaggacgctgatgctgaggaacaaccgtatc
agctgcatccacaacgacagcttcacgggcctgcgcaacgtgcgcctcctctcgctctac
gacaaccagatcgccaccatctccccgggagccttcgacacgctgcaggccctctccacg
ctaaaycttctggccaaccctttcaactgcaattgccagctggcgtggctgggcgactgg
ctgcgcaagaggaagatcgtgacggggaacccgcggtgccagaacccagacttcttgcgg
cagattcccctgcaggacgtggcctcccccgacttcaggtgtgaagaaggccaggaggag
gggggctgcctgccccgcccgcagtgcccccaggagtgcgcctgcctggacaccgtggtt
cgatgcagcaacaagcacctccagaccctgcccaagggcatccccaagaatgtcacagag
ctctacctggatgggaaccagttcacgctggttccagcacagctgtccaccttcaagtac
ctgcagcttgtggacctgagtaacaacaagatcagttccttaagcaattcgtcctttacc
aacatgagccagctgaccactctgatcctcagctacaactccctgcagtgtatccckcct
ctggccttccaggggcttcgctccctgcgcctgctgtccctgcatggcaatgacatctcc
accctccaagagggcatctttgcagacgtgacttccctgtctcacctgtaa
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