Brenneria izadpanahii: HC231_09075
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Entry
HC231_09075 CDS
T07407
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
biz
Brenneria izadpanahii
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
biz03009
]
HC231_09075 (rlmC)
Enzymes [BR:
biz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
HC231_09075 (rlmC)
Ribosome biogenesis [BR:
biz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HC231_09075 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QTF10735
LinkDB
All DBs
Position
2020406..2021545
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AA seq
379 aa
AA seq
DB search
MHCARYSTGTCRSCQWLEKSYPQQLSDKQQHLADLLRPYAVQQWLPASPSAQSAFRNKAK
MVVSGSVERPLLGMLHRDGRAVDLCDCPLYPDSFGPVFDVLKLFIARAGLTPYNVARRRG
ELKYLLLTESSSRGAFMLRFVLRSENKLAQLRAALPWLQQQLPQLEVISVNIQPVHQAIM
EGKKEIILSDSSALAERLNHVPLYIRPQSFFQTNPHVAAALYATARDWVMELNIKSMWDL
FCGVGGFGLHCASPGMRLTGIEISAEAIACARLSAEQLGFTQIAFQALDSTQFAVGNAQI
PDLVLVNPPRRGIGSELCAYLSRMAPGYILYSSCNAESMAKDMEALTRYRPLRVQMFDMF
PHTAHYEVLTLLQREEPAR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgcgcgttatagcacgggaacctgccgttcctgccagtggctggaaaaatcc
tatccacagcaactctctgataaacagcaacatctggctgatttgttgcggccgtatgcg
gttcagcaatggttgcccgcctcgccttcggcgcagtccgcgtttcgtaacaaagcgaaa
atggtggtcagcggaagcgttgagcggccgctgctggggatgctgcatcgagacggccgc
gcggttgatttatgcgactgtccgctttaccccgatagtttcggaccggtgtttgacgtt
ctgaagctatttatcgccagagcggggttgacgccctataacgtcgcccgccgtcgcgga
gagctaaagtatctattgctgacggagagtagctcgcgcggcgcttttatgctgcgtttt
gttctgcgttcggaaaacaaactcgcgcagttgcgcgcggcattgccatggctgcaacag
caactgccccagcttgaggtgatttcggtaaatattcagccggtgcatcaggcgatcatg
gaagggaaaaaggaaattatactcagcgattcatcagcgctggcggaacggcttaaccat
gttccgttatacattcgtccgcaaagttttttccagactaatccccatgtggcggcggcc
ttatatgctaccgcccgcgattgggtgatggaattaaacatcaaaagcatgtgggatctt
ttttgtggggtagggggctttgggttgcattgcgcctcgccggggatgcggctgaccggc
attgagatcagcgccgaagccatcgcctgcgcgcgtctgtccgccgaacagctcggtttt
acgcagatagcgtttcaggcgctggattcgacgcagtttgctgtcggtaacgcgcagatc
ccggatttggtgctggttaatccgcctagacgggggatcggcagcgagctatgcgcctac
ttgagccgcatggcgccgggctatattctctattccagctgtaacgccgaaagtatggcg
aaagatatggaggcgctgacgcgctatcgccctctgcgggtacagatgtttgatatgttc
ccgcacaccgcgcattatgaagtgttaacgctgctgcaaagggaagagccggctcgataa
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